Ruegeria sp. TM1040: TM1040_3530
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Entry
TM1040_3530 CDS
T00359
Name
(GenBank) succinate dehydrogenase subunit B
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
sit
Ruegeria sp. TM1040
Pathway
sit00020
Citrate cycle (TCA cycle)
sit00190
Oxidative phosphorylation
sit00650
Butanoate metabolism
sit00720
Other carbon fixation pathways
sit01100
Metabolic pathways
sit01110
Biosynthesis of secondary metabolites
sit01120
Microbial metabolism in diverse environments
sit01200
Carbon metabolism
Module
sit_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sit_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sit_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
TM1040_3530
00650 Butanoate metabolism
TM1040_3530
09102 Energy metabolism
00190 Oxidative phosphorylation
TM1040_3530
00720 Other carbon fixation pathways
TM1040_3530
Enzymes [BR:
sit01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
TM1040_3530
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_17
Fer4_8
Fer4_10
Fer2
Fer4_7
Fer4_18
Fer4_9
Fer4_16
Motif
Other DBs
NCBI-ProteinID:
ABF62502
RoseoBase:
TM1040_3530
UniProt:
Q1GLG4
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Position
mega:564490..565269
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AA seq
259 aa
AA seq
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MVEFALPKNSRITTGKTWPKPEGATNVRKFQIYRWNPDDGKNPSVDTYFLDMDKCGPMVL
DALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGINTLACIYGLDEIKGDVKIYPLPHMP
VVKDLIPDLTHFYAQHASIMPWLETKTNRPAKEWKQSIEDRKKLDGLYECVMCASCSTSC
PSYWWNGDRYLGPAALLHAYRWIIDSRDEATGERLDNLEDPFKLYRCHTIMNCAKTCPKG
LNPAKAIAHIKKLMVERTV
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaattcgcacttccgaaaaactccaggatcaccactggcaagacgtggcccaag
cctgaaggcgcaaccaatgtgcgcaagttccagatctaccgctggaacccggacgatggc
aaaaaccccagcgtggacacgtatttcctcgatatggacaaatgcggtccgatggttctg
gacgcgctcatcaagatcaagaacgagatcgacccgacgctgaccttccgccgctcctgc
cgcgagggcatctgtggctcctgtgcgatgaacatcgacgggatcaacacgctggcctgt
atctatggtctcgacgagatcaagggcgacgtgaagatctatccgctgccgcatatgccg
gtggtgaaggaccttattcccgatctcacgcatttctatgcccagcatgcctcgatcatg
ccgtggcttgagaccaagaccaaccgtcccgccaaagagtggaagcagtccatcgaggac
cgcaagaagcttgacgggctttatgagtgcgtgatgtgcgcgtcctgctccacctcctgc
ccgagctactggtggaacggcgaccgttacctcggccctgccgcgctgctgcatgcctat
cgctggatcatcgacagccgcgacgaggcaaccggtgagcgtctcgacaatcttgaagac
ccgttcaagctctaccgctgccacaccatcatgaactgcgccaagacctgccccaaaggc
ctgaaccccgccaaggcgatcgcgcatatcaagaaactgatggtcgaacgcaccgtttga
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