Ruegeria sp. TM1040: TM1040_3599
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Entry
TM1040_3599 CDS
T00359
Name
(GenBank) Oligopeptide/dipeptide ABC transporter ATP-binding protein-like protein
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
sit
Ruegeria sp. TM1040
Pathway
sit02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TM1040_3599
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sit02000
]
TM1040_3599
Transporters [BR:
sit02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
TM1040_3599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_22
SMC_N
RsgA_GTPase
AAA_25
AAA_16
NB-ARC
AAA_5
nSTAND3
PRK
RNA_helicase
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ABF62566
RoseoBase:
TM1040_3599
LinkDB
All DBs
Position
mega:complement(648155..649138)
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AA seq
327 aa
AA seq
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MSDVLTLNGVTKTYSVKQGLFGARKPLTAVNNVSLSLGKGEVLGLVGESGCGKSTLAKLL
LGLEKPTSGQVLVDGAPMDALDRRALAGRLQPIFQDPYSSLNPRKSIYDLISLPLRVHKI
GDSTSQRKAVKEMLDVVGLPQRVMNTYPSQMSGGQRQRVAIARALVMKPEIVICDEPTSA
LDVSVQSQILNLLGDLRREFGLTYLFISHDLAVVEHLATRVAVMYLGRIVEEAPVAELFE
TPKHPYTRALLSSVLTPEPGLGVPETALGTAYPNPIAPPSGCAFHPRCPLATAHCKTQAP
RTIATAQGRVECHYEDPDSPMPRKDAA
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgttctgaccctgaatggggtgactaaaacctacagcgtcaaacagggtctg
ttcggcgcacgaaagccgctcacagcggtgaataacgtctcactctcactgggcaaggga
gaggtcctgggcctcgtgggagagtcggggtgcggcaaatccaccctcgccaagcttttg
cttggactggaaaaacccacctcgggtcaggtacttgtggacggcgcgccaatggacgcg
ctggatcgtcgcgccctcgcgggtcggcttcagcccatatttcaggacccctactcctca
ctcaatccgcgcaaatccatctatgatctgatctctttgcccctgcgcgtacacaagatt
ggcgacagcaccagccagcgcaaggctgtgaaagagatgctggatgtggtcggcctgccg
caacgggtcatgaacacatacccaagccaaatgtctggtggccagcgtcagcgcgttgcc
attgcccgtgccttggtgatgaagccggaaatcgtcatctgcgatgaacccacctccgcg
ctggatgtttccgtgcaaagccagatcctgaacctgctcggcgacctcaggcgcgagttt
ggcctcacctatctgttcatcagccacgatctcgcggttgttgaacacctggcgacgcgg
gtggcggtgatgtatctcgggcgtattgtcgaagaagccccggtggccgaactattcgag
acgcccaaacacccctatacccgcgcgctcctgagctcggtcctcaccccagagccggga
ctgggtgtgccggaaacagcgcttggcaccgcctatccaaacccgatcgcccctccttcg
gggtgcgcctttcatccacggtgtccgttggcaacggcgcattgcaaaacgcaggctccc
cgcacaatcgcgactgcgcaagggcgtgtggaatgccactatgaagatcccgacagcccg
atgccgcgaaaggatgcagcatga
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