Ruegeria sp. TM1040: TM1040_3661
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Entry
TM1040_3661 CDS
T00359
Name
(GenBank) ABC transporter-related protein
KO
K16784
biotin transport system ATP-binding protein [EC:7.6.2.-]
Organism
sit
Ruegeria sp. TM1040
Pathway
sit02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
TM1040_3661
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sit02000
]
TM1040_3661
Transporters [BR:
sit02000
]
ABC transporters, prokaryotic type
Metallic cation, iron-siderophore and vitamin B12 transporters
Biotin transporter
TM1040_3661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
AAA_15
AAA_29
DUF87
RsgA_GTPase
nSTAND1
AAA_23
AAA_22
Dynamin_N
FtsK_SpoIIIE
Peptidase_M3_N
AAA_24
AAA_13
Motif
Other DBs
NCBI-ProteinID:
ABF62628
RoseoBase:
TM1040_3661
UniProt:
Q1GL38
LinkDB
All DBs
Position
mega:complement(713579..714259)
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AA seq
226 aa
AA seq
DB search
MIEVQDVSLTLDDRPILRDINLTLREKRIAIVGSNGSGKSSFVRLLNGLRLPSSGRVCVD
GQDTRTEGRKLRRRVGFVFQNPDNQIVFPIVEEDVAFGLKNLGVPPKERDARVTAVLERY
GLQEMRKQPAHTLSGGQKQLLAIAGVLVMEPEYVVLDEPTTLLDLRNTLRVSQAISALEQ
TAIMVTHDLDLIREFDRVIVFEQGRVFADDVPNAALERYVEAMRDA
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaagttcaagatgtcagcctgacactggatgatcggccgatcctgcgcgacatc
aacctcacgctgcgcgaaaagcgaattgccatcgtgggaagcaatggcagtggcaaaagc
agctttgtacgtttgctgaacggtttgcgcttgccgagctcgggtagggtgtgcgtggat
ggccaagacacccgcacagaaggccgcaaactgcgccgtcgcgtggggttcgtgtttcaa
aaccccgataatcagatcgtgtttcccatcgtcgaggaagacgtggcctttggcctcaaa
aaccttggtgtccccccaaaagaacgtgacgcgagggtcactgctgtgctcgagcgctat
ggcttgcaagagatgcgcaaacagcccgcgcatacattgagcggagggcagaagcagctt
ctagcgattgcgggcgtgcttgtgatggagcctgagtatgtggtgctcgacgaaccgacg
acgctgcttgatctgcgcaacacgctgcgagtttcgcaggcaatcagcgcactcgagcaa
accgcaatcatggtgactcatgaccttgacctcattcgggagtttgaccgcgtgatcgtc
tttgaacagggccgggtctttgcggacgacgtgccgaatgcagcactcgaacgctacgtg
gaggcgatgcgcgatgcttga
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