Ruegeria sp. TM1040: TM1040_3687
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Entry
TM1040_3687 CDS
T00359
Name
(GenBank) MscS Mechanosensitive ion channel
KO
K22044
moderate conductance mechanosensitive channel
Organism
sit
Ruegeria sp. TM1040
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sit02000
]
TM1040_3687
Transporters [BR:
sit02000
]
Other transporters
Pores ion channels [TC:
1
]
TM1040_3687
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
MAP17
DUF7382
G0-G1_switch_2
DUF2518
CooC_C
Motif
Other DBs
NCBI-ProteinID:
ABF62654
RoseoBase:
TM1040_3687
UniProt:
Q1GL12
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Position
mega:complement(746168..748522)
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AA seq
784 aa
AA seq
DB search
MSRLTALLRLWLIAATIGLLGSVPADAQSTLVSQGTSEEARSQSDLADAIRQAAEAGVGV
VIVDSSGRALSGAEVVAQAGSAMEEEPGVMGGASSMMKAQSELRDFRSKLNERLKSLPSS
YIEMAYILRATSPDGRIITYVKVVLITTVLLLIGRWLSTEIYGKRLIKSYVVSRIEEKPE
GYAGKMPFLFIRFAAGLGGTLFAMIFALIVTLLVFGPSGDVSIEFTSLAVYLTFFVARTI
SDLWRMVLSPYLSQYRIPSLSDRDAKRLYFWLSGLATFDFVAVMVSTWVQDFGLNYNIYA
LTYSLLMLASSLLAILLVLFNARAISGAIRHVGDAHVVAWPNRLLSWVWAPIVILYIAFG
WLALTFDLVLENPSALPPNMGLFAVLTSILVVYGLINYVIEQFTSRRRIIETTDDTTQSD
DENSEDAQEKTTARHPIATYKDLARRAAGILAFLVGAVSLIFIWNPEFAMEDAPWLDRAI
DVLVILFIGYLVFHIARIWIDSKIEEETQDQPDGELGDEGGGSSASRLATLLPLFRGAIL
AVVVVTIILIVLMEIGINVSPLFAGAGVVGLAVGFGSQTLVRDIFSGAFFLIDDAFRRGE
YIDIGSVKGTVEKISVRSFQLRHHLGALHTIPFGEIQVLTNYSRDWVIMKLPLRVTYDTD
VEKVRKLIKTLGKELLNDPVIGHNFIQPLKSQGVIEMQDSAMIIRVKFMTKPGDQWLVRK
KVFQEIRDLFEREGIKFAHREVTVRVVDDTGEKVPEAKRDAALGAAQAAIEDDLMDSNDG
GDDR
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagattgaccgctttgctccgcctgtggctgatcgcagctacgatcggcctgctt
ggcagtgtgcctgctgatgcgcaatcgacgctggtgtcccagggaacctccgaggaagcg
cgttctcagagcgatcttgctgatgcgatccgacaggccgcagaggcaggtgtgggcgtc
gtgatcgtcgacagcagcggccgcgcgctcagtggtgccgaagttgtggcgcaggccggg
tccgcgatggaagaggaaccgggcgtcatgggcggcgcctcatcaatgatgaaggcacaa
agcgagctgcgcgattttcgcagcaagctcaacgaacggctgaagtcgctccccagctcc
tatatcgagatggcctacatcctgcgcgcgaccagccccgacggccgcatcatcacttat
gtcaaagtggtgctgattacgaccgtcctgctgttgatcggacgctggctctcgaccgag
atatacggcaagcggcttatcaaaagctatgtcgtgagccgtatcgaggaaaagcccgaa
ggctatgccgggaagatgccattcctgttcatccggtttgctgccggtctgggcggtacg
ctttttgcaatgatctttgcgctgatcgtgacgctgctggtgtttggcccctcgggggat
gtctcgatcgagttcacgtcgcttgcggtctatctaacgttttttgtggcacgcacgatc
tctgatctgtggcgcatggtgctctcgccctacctcagccagtatcgcatcccgtcgctt
tcggacagggatgcaaagcggctctacttctggctctcgggacttgcgacctttgatttt
gtcgccgttatggtttcgacctgggtgcaggattttggtctcaactacaatatctatgcg
ctgacctattcgttgctgatgctggcctcttcgctgctggcaatcctgctcgtgctgttc
aacgcgcgggccatttccggtgcgatccgccatgtgggcgatgcacacgtggtggcctgg
ccaaaccgtctgctgtcgtgggtctgggcacccatcgtaatcctctacatcgcctttggc
tggttggctctgacgtttgacctcgtgcttgagaacccaagcgcgctgccgccgaatatg
ggtctctttgcggtgctgacctcgatcctggtggtctatggtctgatcaactacgtgatc
gaacaattcacctcgcgccgccggatcatcgagaccacagatgacacgacgcaaagcgac
gacgaaaacagcgaagacgctcaagaaaagaccacggcgcgccacccgattgcgacctac
aaggatctggctcgtcgcgcagcgggcatcctggcctttctcgtcggtgccgtttcgctg
atattcatctggaaccccgagtttgcaatggaggatgcgccctggctcgatcgggcaatc
gatgtgctggtgatcctcttcatcggatatctggttttccatatcgcccggatctggatt
gacagcaaaatcgaagaagaaacgcaagatcagccggatggcgagttgggcgacgaaggc
gggggcagcagtgccagccgcctggccacgctcctgcctctgttccgtggcgcaattctg
gcggtggttgtggtcacgatcattctcatcgtgctgatggagatcggcatcaatgtgagc
ccgctgtttgccggtgccggtgtcgtgggcctggcggttggatttggctcacagaccctg
gtgcgcgatatattctcgggcgcgtttttcctgatcgacgatgcctttcgccggggcgaa
tacatcgacatcggcagtgtgaagggcacggtcgagaagatctccgtgcggtcgtttcag
ctgcgccatcaccttggggcgctgcacaccattccctttggcgaaatccaggtgctgaca
aactattcgcgcgactgggtgatcatgaagctgccgctgcgcgtgacctatgacacggat
gtcgaaaaggtgcgcaagctgatcaagaccctcggcaaggagttgctgaacgatccggta
atcggtcacaacttcattcagcctctgaaatcgcagggcgtgatcgagatgcaggattcc
gcaatgatcatccgtgtgaagttcatgaccaagcccggcgatcagtggctggtgcgcaag
aaggtttttcaggaaatccgggatctcttcgaacgcgagggtatcaagtttgcccaccgc
gaggtcaccgtgcgcgttgtggatgacaccggcgaaaaagtccccgaggctaagcgcgac
gccgcccttggcgcggcgcaggcggctatcgaggatgatctgatggattcgaacgacggc
ggcgatgaccgctga
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