Ruegeria sp. TM1040: TM1040_3737
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Entry
TM1040_3737 CDS
T00359
Name
(GenBank) transcriptional regulator, LysR family
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
sit
Ruegeria sp. TM1040
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sit03000
]
TM1040_3737
Transcription factors [BR:
sit03000
]
Prokaryotic type
Helix-turn-helix
LysR family
TM1040_3737
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_20
Motif
Other DBs
NCBI-ProteinID:
ABF62704
RoseoBase:
TM1040_3737
UniProt:
Q1GKW2
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Position
mega:795993..796931
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AA seq
312 aa
AA seq
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MSDRLPPLTALRAFDAAARHMSFAKAADELSVTPAALSFQIKSLEEHLGAPLFRRLNRAV
ELTEAGAALAPGVDEGFQALSAAWRQARRVLDTTSLTVTAGPALTAKWLAPRLYEFARSH
PDIDLRLSAGLKMVDLRRDHVDVAIRFGYSVDDYLVAQAARPEWLTPVMTPELCAKYPTP
QSLRDAPLIYDDSIGFLSPSCDWPTWFRAMGLEFTPGHGTHFSHADHAIDAACAGLGVAL
GRRPMIIKDVQEGRLVAPFKVAIETDAKFHFLCLPSSQDRPQIRAFREWFFSEIEKTAHM
WDDFTIIPVKDL
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaccgactcccccctctcacagctttgcgcgcgtttgacgctgccgcgagacat
atgtcttttgcaaaagccgccgacgagctcagcgtgacgcctgcggccctgtcttttcag
atcaaatcgctggaggagcatctgggcgcgccgctctttcgccgtctcaaccgcgccgtc
gagctcacagaggcaggtgcggcgcttgcgcctggcgtggatgaggggtttcaggccctg
agcgcggcgtggcggcaagcgcggcgggttctcgataccacgtcgctcaccgtgaccgca
gggccagcgctgacggcaaagtggttggcgccacggctctatgagtttgcccgcagccac
ccggacattgacctgcgcttgtctgcaggcctcaagatggtggacctgcggcgcgatcac
gtcgatgtggccattcgatttggctatagcgttgacgattatcttgtggcgcaagccgcg
cgccctgaatggctgacgcctgtgatgacgccggagctatgcgcaaagtacccaactccc
cagagcctgcgcgatgcgcctctcatctatgatgacagcatcggttttctcagcccatct
tgtgattggccaacatggttccgcgccatggggctggagttcacacccggtcacggcacg
catttttctcacgctgatcacgccatcgacgctgcctgcgccgggctcggcgtggcgctc
gggcgacgcccgatgatcatcaaggatgtacaggaggggcgcctggttgcgcccttcaag
gtcgcgatcgaaacagatgccaagtttcatttcctctgcttgcccagttcgcaggatcgc
ccgcagatcagggcttttcgcgaatggttcttttcggagattgagaaaacggcgcatatg
tgggacgacttcacgattatccccgttaaggatctttag
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