Ruegeria sp. TM1040: TM1040_3767
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Entry
TM1040_3767 CDS
T00359
Name
(GenBank) Hypothetical protein yeeJ
Organism
sit
Ruegeria sp. TM1040
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4214
HemolysinCabind
Cadherin_4
Cadherin_3
Motif
Other DBs
NCBI-ProteinID:
ABF61900
RoseoBase:
TM1040_3767
UniProt:
Q1GN66
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All DBs
Position
unnamed:27..5300
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AA seq
1757 aa
AA seq
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MSTILTFSSNDGNGIGADNLATDGEGGSSDIGGITIQIANISDVLGTQISSLNWYNDGNL
SSGDGFSGITTDFAFGGEWKGMSIRSAGGEEFQLESFDFFDWGTFPYAASTLNITGFRDN
VQVATDTFSSNNNNNRVNVDISGNTTFDAVDEVRITFDIGTGYLSLNNITIANAVPPNTA
PSLGGTPADDTAVEDAAAAIDLSAYNISDAEGDDPLTLTLAVDRGTIASVDGNGTVDGVT
IASSSTSNMTLQGSAAALNTYLDDTSHITFTTDSNDTSAATLTVTPNDGTANGTADTVTI
TITPVNDDPSVSGLPASVTVAEDTLSNIDLSAASIGDIDSSTITVTLSASGGSFGTPSDG
AGTGGGVTETLVNATTISLVGSPADISTYLDTASNIRYTPPSNAVGAGQATISVTANDGD
GSGDVALGTVQVNVTEVNDPPVLTGLDATPSVTEDGIPVVLDADVTISDEELDALNGGNG
DYAGATLAIARNGGADTSDILSVITGGNLTVAGGPNGGGTISASGNVIATISNTGNGQLQ
ITFADNGTTPTTALVNESLQAIRYTNGADDPATSVQLDWDFSDGNGHAAGSVTVSLTNVN
DAPTLTATGGNPTFVEGGAAQDLYNTVSADAVEIGDRITGLTLTVTNLADSASEILSIDG
SDVALTDGNSVTTATNSLSVSVNVSGTTATVSFTGATLSAAQAQTLVDGLTYRNLSDNPT
TAGNRVVTITGITDDGGTANGGAASNAPTLSSTVSLTAVNDAPSVASVFGETSQIITGGG
AQAITGLANATVSNADSIDYNGGFLTIAQISGAGNGSWGVDGTTVTAGGDGTILVGETLQ
VSGVTIGTIDATADGQSGHDLTINFNADSSSARIEAFLQNLRFEAPSSIGDRGYTLTLND
GDGIANGGDADASGSITLSITPNPPVLGNLDGDSVSATENAGAVSLDIGANATVTDADSP
NFNGGTLRASVTNNADAASDVLSVATSGVVALAAMTAGSNVSVSGTVIGTLANNIVAGND
FVVTLNADATPARVQSIVQALSFEATGEAPTAGTRTVSVTLSDGSGSGNAHVNVAVTALN
DAPQITGLVSDVSFTEDTPANLDLSALTLSDVDTTSSLTLTLTASAGTLAATSGGGVTVG
GSATGTLILAGTIVDIDTFLNSATHVHYSPAANAAGNDAATISLTINDTGTSTDLGTVNV
DITPVNDAPTNPATADIQQAFDTPHTFTVGDFGFADVDGDTLQSVRIDTLPGAGVLSLNA
SPVSATDVITIGDIIGGNIVFTAASGASGDDYAIFTYSVNDGTTFSAAPGTITIDVAAAP
PAGGGGQPAEPEPDLVDGVPVERTTTTENSLSVEKIVITPVSNTREDTDAATSLADIPLH
FDSDGQAVTTVSVPTGVGFTARANETATIQTSFRDGLYLLRDSAPESDWFSMINGLDQWL
NGVSAGWLNQVTLTTNTTSAPSEPIRITGREGDSTEVMVIDGSQLPVGAVLDLDNIEFAI
IVGDVTVRSGAGTNVVYAGSGAQNIVLGADDDHLNGGDGDDTIGSEGGDDRLFGDAGNDT
LFGGPGANVMHGGLGMDTIIYAANRDRFEISIEKGQVIVTSLDGPSLQDTIINAELIRFT
DTDLSIDASSSAFSESDLTIATLFTTVLGRQADLAGYQFWTNVADTKLDLASIAMFMLRS
EENTQTEGQAFDTLSLEAQIDRLYQEILGRAPDDAGAAFWNAAAEAGFAIDDIAGAFVDA
PEFVGLALQPTGLDFLI
NT seq
5274 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacaattctgactttttccagcaacgatggcaacggcatcggtgccgataatttg
gcgaccgacggggagggagggagcagcgatatcggcgggatcacgatccagatcgccaat
atcagtgacgtgctcggcacacagatctcctcactcaactggtacaatgacggcaacttg
tcatccggcgatgggttctccggaatcacgacagacttcgcctttggcggggaatggaag
gggatgtccatccgcagtgctggaggcgaggagtttcaactcgagtcgtttgacttcttt
gactggggcaccttcccgtacgcggcatcgacactcaatatcactggctttcgggacaac
gttcaggtcgcaaccgataccttctcgtcgaacaacaataacaatcgggtcaacgtcgac
atctctgggaatacgaccttcgacgctgtcgatgaagtacggatcaccttcgatatcggc
actgggtatctatctctgaataacatcacgattgccaacgcggtgccgcccaacacggcg
ccatcgctcggcggcacgccggccgacgacacggcagttgaagacgccgccgcagctatc
gatctgtccgcctacaatatctcggatgccgagggggatgacccgctcacgctgaccctg
gccgttgatcgcggcacgattgcgtctgtggatggcaacggaacagtcgacggcgtgacc
atcgcgagttccagcaccagcaacatgactttgcagggctcggccgctgcgctcaacacc
tatctcgacgacacgagccacattacctttacgaccgacagcaacgatacgagcgcggcc
acactgacggttacccccaacgacggcacggccaatggcaccgcggataccgtgaccatt
acgatcacgccggtgaacgacgacccttccgtctctggtctgcctgcttcggtgacggtg
gccgaagacacactcagcaatattgatctctcggcagcaagtattggcgacatcgacagt
agcaccatcacggtgacactctctgccagcggaggcagctttggcacgccgagcgacggt
gcgggcaccggcggtggcgtgaccgagacgctggtgaatgcgaccaccatctcgctggtg
ggatcgccagccgatatcagcacctatctcgataccgcatcgaacatccgctatacaccg
ccttcgaacgctgtgggggcgggacaagcgacgatcagcgtcaccgcgaatgacggcgac
ggctcgggtgacgtggcgcttggcacagtgcaggtgaatgtgactgaggtgaacgatccg
cctgtgctgacgggtctcgacgccacgccgagcgtgaccgaagatggcatccccgtggtg
ctcgatgccgatgtgaccatctccgacgaagagctggacgcgctcaatggcggtaacggc
gactatgccggggcgacacttgcgattgcgcgcaatggtggcgcagatacgtccgacatc
ctgtcggtgatcaccggcggcaacctcacggttgcgggcgggcccaacgggggcggtacg
atcagcgcgagcggcaacgtcatcgcaaccatcagcaacactggaaacggccaacttcag
atcaccttcgccgacaacggcaccacgccgacgaccgctctcgtcaacgaatccttgcag
gcgatccgctacaccaacggcgcagacgatcccgccacctcggtccaactagactgggat
ttctcggacgggaacggacatgctgcgggctcggtcaccgtgtcgctgaccaacgtcaac
gacgcaccgaccctgacggcgaccggcggcaacccgacctttgtcgagggcggcgcggcc
caggatctctacaacacggtctctgccgatgccgtggagatcggagatcgcatcacgggc
ctgaccctgacggtcaccaatctcgccgatagtgcatccgagatcttgtcgatcgatgga
tccgatgttgccctgacggatggcaattccgtgaccacggcgaccaacagcctgtcggtg
tccgtgaacgtaagcggcaccaccgcgacggtgtcgttcaccggggcgacgctgagcgcg
gcgcaagcgcagaccctcgtcgacggcctcacctatcgcaacctgtccgacaatcccacg
accgccggcaaccgggtggtcacgatcaccggcatcacagatgatggtggaaccgccaat
ggcggtgcggcaagcaatgcaccaaccctgtcctcgacggtcagcctcacggcggtcaat
gatgcgccgtcggtggccagcgtctttggcgagaccagccagattattacgggcggcggc
gcacaggcgatcactggccttgccaatgcgaccgtgtcgaacgcagattcgatcgattac
aacggcggctttctaaccatcgcccagataagcggcgcgggtaatggcagttggggcgtc
gatggtacgacggtcaccgcaggcggagatggcacaattttagtaggcgagacactgcaa
gtcagcggtgtaacgatcgggacaatcgatgcgacagcagatggacagagtggccacgac
ctgacgatcaacttcaacgccgactcaagctcggcccgcatcgaggcgttcttgcagaac
ctgcgcttcgaggcaccatcctcaatcggcgatcgaggctatacgctcacactcaacgac
ggggatggcattgccaatggtggcgatgcggatgccagcggcagtatcacgctctcgatc
acacccaatccgcctgtcctgggcaacctcgatggcgacagcgtcagcgccaccgagaac
gccggtgcggtctcgctggatatcggcgcaaacgcaacggtcaccgacgccgactcgccc
aatttcaacggaggcaccctgagggcctcggtgacaaacaacgccgatgcagccagcgac
gttctaagcgtcgccaccagcggtgtcgtggccctcgcggccatgacggcaggctcgaac
gtttcggtgtctggcaccgtgatcggcacgcttgccaacaacatcgtggctggcaacgac
ttcgtcgtgaccctgaacgcggatgccacgccggcgcgggtgcagagcatcgttcaggca
ctgagctttgaagcgacaggcgaggcgccgacagctggcacacggaccgtaagcgtcacc
ctctccgacggttccggatctggaaacgcccatgtcaatgtggcggtcacagcgctcaac
gatgcgccgcaaatcacgggcctggtgagcgatgtctcgtttaccgaggacaccccggcc
aatctcgatctctccgcgctcacgctctctgatgtcgacacaacgagtagcctgaccctg
acactaaccgccagtgccggcacgctggcggcgacaagtggcggcggtgtgacggttggc
gggagcgcaacaggcacattgatcctcgcgggcaccatcgtggatatagacacgttccta
aacagcgccacccatgttcattacagcccggccgcgaatgccgccggcaatgatgcagcc
acgatctcactgaccatcaacgataccggcaccagcacggatctcgggacggtgaatgtg
gacatcacgccggtgaatgacgcgccgaccaacccggcaaccgccgatattcagcaagcc
ttcgacacgccgcataccttcactgtgggggatttcggctttgccgacgtggacggcgat
acgcttcaaagcgtgcggatcgacacgctgccgggtgctggcgttctgagcctgaacgcc
agcccggtcagtgcaacagacgtcattacgatcggtgacatcatcggcggcaatatcgtg
ttcacggccgcctccggcgcatcgggcgatgattacgcaatcttcacctacagcgtgaac
gatggcaccacgttctctgctgccccgggcaccatcacgatcgacgtcgccgcagcgccg
cctgcaggcggcggtggccagccggccgagccggaaccagacttggttgacggggtccct
gttgagcggaccacgacaaccgagaacagcctcagtgtcgagaagatcgtcatcacaccc
gtctcgaacacacgcgaggacacggatgcggccacatcgttggccgatattccgctgcat
ttcgacagcgacggacaagccgtgaccactgtcagcgtgccaacgggcgttggattcacg
gcacgggcaaatgagaccgccacgatccagaccagcttccgggatgggttgtacttgctg
cgcgattccgcgccagaatccgactggttctcgatgatcaacgggctcgatcaatggctg
aacggagtaagcgcgggttggctcaaccaggtcacgctcaccacgaacacaacctcggca
ccctctgagccgatccggattaccggacgggaaggcgacagcactgaggttatggtgatt
gacggctcgcaattgcctgtaggcgctgtgctcgatctcgacaatatcgagtttgcgatc
atcgtcggcgatgtcaccgtgcgcagcggtgctggcacaaacgtcgtctatgctgggagc
ggcgctcagaacatcgtgcttggcgcagatgatgaccacctgaacggcggcgatggagat
gacacgatcggatcggaaggcggtgatgatcgcctgtttggcgatgcgggcaacgacacg
ctcttcggcggcccaggtgcaaacgttatgcacggcggcttgggtatggataccatcatc
tacgcggcaaaccgagatcgcttcgagatcagcatcgagaagggccaagtgatcgtgacg
tcgctcgatggcccgagcctgcaggatacgatcattaacgcggagcttatccggttcacg
gatacggatctttcaatcgatgcgtcctcgagcgccttctcagaaagcgatctgacgatt
gccacgctcttcacgacggttctcggccgccaggccgatctggccggctaccagttctgg
actaacgtggccgacacgaagctcgatctcgcctccatagcgatgttcatgctgcgctcg
gaggaaaacacgcaaaccgaaggtcaggccttcgatacgctcagccttgaggcgcagatc
gaccgcctctatcaggagatccttggccgcgcgccggatgatgcgggcgccgcgttctgg
aacgcggctgccgaggccggctttgccatcgacgacatcgctggcgcctttgtcgacgcg
cccgagttcgtgggtctggcgctgcagccgaccgggctcgatttcttgatctga
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