Ruegeria sp. TM1040: TM1040_3776
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Entry
TM1040_3776 CDS
T00359
Name
(GenBank) NAD-dependent epimerase/dehydratase
KO
K08679
UDP-glucuronate 4-epimerase [EC:
5.1.3.6
]
Organism
sit
Ruegeria sp. TM1040
Pathway
sit00053
Ascorbate and aldarate metabolism
sit00520
Amino sugar and nucleotide sugar metabolism
sit01100
Metabolic pathways
sit01240
Biosynthesis of cofactors
sit01250
Biosynthesis of nucleotide sugars
Module
sit_M00999
UDP-GlcA/GalA biosynthesis, UDP-Glc => UDP-GlcA => UDP-GalA
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
TM1040_3776
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
TM1040_3776
Enzymes [BR:
sit01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.6 UDP-glucuronate 4-epimerase
TM1040_3776
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
Gly_kinase
Motif
Other DBs
NCBI-ProteinID:
ABF61909
RoseoBase:
TM1040_3776
UniProt:
Q1GN57
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Position
unnamed:complement(22480..23481)
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AA seq
333 aa
AA seq
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MRTALITGTAGFIGYHLATYLLASGWQVVGLDCLSPYYDIALKRRRHAMLEVNDNFIPVI
GKLEDPGRLMGLLADHKPNAVIHLAAQAGVRHSIDAPRDYLEANLIGTFEVLEAARAHPP
EHIMIASTSSAYGANTNIPFDEHQKADHQMSFYAATKKAGETMAHSYAHLYGLPTTMFRF
FTVYGPWGRPDMALFKFTKAIEAGEAIDVYNHGRMSRDFTYIDDLVAGITGLIEAVPGDT
PVSTQDTLSPVAPFRIVNIGASKPTPLMDYIAALETALETTARKNLMEMQPGDVPATWAD
TTLLSQLTGYEPQVSVEEGVARFVAWYRGYYAS
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaccgctctcatcaccggcacggctggcttcattggctaccatcttgcgacttat
cttctagcctcaggctggcaggttgtagggctcgattgtctttcaccttattatgacatc
gccttaaaaaggcgccgccacgctatgctggaggtcaacgataatttcatccctgtgatc
ggcaagctcgaagatccagggcgcttaatgggcctactcgctgaccacaaacccaatgcg
gtgatccatctggccgctcaagccggagtgcgccattcaattgacgcgccgcgcgactat
ctcgaggccaacctgataggtacttttgaagtgctggaagctgcccgcgcgcatccgccc
gagcatataatgattgcctccacgtcttcggcttatggtgccaataccaacatccctttc
gatgagcaccagaaagcagatcatcaaatgtcattttatgccgccaccaaaaaggcaggc
gagacgatggctcattcctatgcacacctctatggtctaccaaccacgatgttccggttc
ttcacggtgtacggcccctggggtcgaccggatatggcgttgttcaagttcaccaaagcg
atagaggccggtgaggcgatcgatgtctataaccatggacgcatgagccgagactttact
tatatcgatgatttggtggcgggtatcaccggactgattgaggcagtgcccggtgatacg
cctgtctctacgcaagacaccctgagcccagttgcccctttcaggatcgtcaatatcggg
gcctcaaaacccacgccgctgatggattatattgctgcgctagaaaccgcgctagagacc
accgcccgaaagaacttgatggagatgcagccaggagacgtgccggcaacctgggcagac
accactttgttgagccagcttaccggctatgagcctcaggttagtgtcgaagagggtgtc
gcccgttttgtcgcttggtaccgaggttattatgccagctga
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