Ruegeria sp. TM1040: TM1040_3835
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Entry
TM1040_3835 CDS
T00359
Name
(GenBank) Type I secretion system ATPase PrtD
KO
K12536
ATP-binding cassette, subfamily C, type I secretion system permease/ATPase
Organism
sit
Ruegeria sp. TM1040
Pathway
sit02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sit00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
TM1040_3835
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sit02000
]
TM1040_3835
02044 Secretion system [BR:
sit02044
]
TM1040_3835
Transporters [BR:
sit02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
TM1040_3835
Secretion system [BR:
sit02044
]
Type I secretion system
Multiple protein transporter
TM1040_3835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
RsgA_GTPase
AAA_16
AAA_29
AAA_33
AAA_25
AAA_22
MMR_HSR1
AAA
AAA_18
AAA_30
CdiI_2
NACHT
MobB
nSTAND1
Rad17
cobW
nSTAND3
AAA_5
AAA_14
APS_kinase
TsaE
AAA_23
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
ABF61966
RoseoBase:
TM1040_3835
UniProt:
Q1GN00
LinkDB
All DBs
Position
unnamed:complement(81194..82906)
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AA seq
570 aa
AA seq
DB search
MKSGSSLAQAYAKYRSILAATVVFSFFVNLLMFVGPMYMLQVYDRVLASRNETTLVMISI
IAVALLISYGLLEFTRSRMLVRAGLQFDQVLASPLFSRVVRMQLANPASSGRNALSDADR
VRDFITGQGVLSFFDAPWTPLFLVLCFAFHPWLGAVATVGAVIIFALALLNEFMTRQSLQ
DANQAGAAASNFAGATLQNAEVIRAMGMVDQLLNRWLGKRDEMLAAQARASDRAGIVLAC
SKFVRMTLQVAILGVGAYLAMKQQISPGIMIAASIVMGRALAPVEQAVGQWKQFVAARQA
NDRLKKLFDSLPDETDRTELPSPKGKVSVAGLTSALPGVKEPILKGVSFDINPGEVLALV
GPSGSGKSTLIRHLVGVARASVGKVSLDGTDLQHWDPKQLGHSLGYLSQDIRLFGGTVAE
NIARFQEDAEDSEIVAAAKLAGAHDMISGLSNGYQTEVGDGGSQLSGGQRQRVGLARAIF
RLPAVVVLDEPNSNLDSEGEAALAACLEQLKAMGRTVIVATHKANLLSLSDKTLILNAGS
VQRFVPTKELLQPQPPKAAHPQTVSAVTSR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccggctcctcgttagcgcaagcttacgcaaagtatcgctctatccttgcagct
accgttgtgtttagtttctttgtaaacctgctaatgttcgtcgggccgatgtacatgctg
caggtctatgatcgcgtgttggccagcaggaatgagacaactttggtgatgatttctatc
atcgcagttgcgttattgatttcgtatggtctgttagagtttacccgttctcgaatgttg
gttcgcgcaggcttgcaatttgatcaagtgcttgcgagcccgctattttctcgtgtggtt
cgtatgcagctcgctaatcccgcctcttcggggcgtaacgctctgagcgacgcagaccgc
gttagagatttcattacagggcaaggcgttctgtcgttttttgatgctccttggacacct
ttgtttttggttctgtgctttgcctttcacccatggctaggtgcggttgctactgtaggt
gctgtgatcatttttgccctcgcgttgctcaatgaatttatgactcggcaaagtttgcag
gatgcaaatcaggcgggtgcagctgcatccaactttgctggcgcgaccctgcagaatgca
gaggttattcgggctatgggaatggtagaccagctccttaaccgctggcttgggaagcgc
gatgagatgttggctgcccaagcgcgggcaagcgaccgcgctggtatcgtgcttgcatgt
tcgaagtttgttcggatgacattgcaagtggcaatcctgggcgtcggcgcctatctagcc
atgaagcaacaaatctctcctgggattatgatcgcagcatcaatcgttatgggacgagcc
cttgcgcctgttgagcaagcggttggtcagtggaaacaatttgtcgcagctcgtcaggca
aacgatcgattgaaaaagctctttgatagtctgccggatgagactgatcgaacagagctg
ccatcgccaaaaggaaaagtttcagttgcggggctgacctccgccttacctggtgtgaaa
gagcccatcttgaagggggttagctttgatattaaccctggtgaagttcttgcattggtt
ggcccatcaggctctggtaaatcaactttgatacgacacttggtaggtgtggcgcgagca
tcagttggaaaggtttcgctagacggcaccgatcttcaacactgggaccccaaacagctt
ggtcattcgttaggatatctatctcaagacatccgcttgttcggtggaacggtggcagag
aatattgctcgcttccaagaagacgctgaagacagcgagattgttgcggctgcaaaactg
gcaggcgctcatgatatgatctctggtctgagtaacggttaccaaactgaagttggagat
ggtggaagccagttgtcaggcgggcagaggcagagagttgggctggcgagagccatcttt
agattgcctgcagtcgtagttcttgatgagcctaattccaacttggatagtgaaggcgaa
gcagcgctggctgcctgtctggagcaacttaaagccatgggaagaacagtcatcgtagca
acgcacaaagctaacctactgtcgctctccgataagacactcattttgaatgcaggtagt
gtccaacggttcgtcccgacaaaagaacttctccagccacaaccacccaaagccgcacat
ccccaaaccgttagtgcggtcacctctcgctag
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