Setaria italica (foxtail millet): 101752645
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Entry
101752645 CDS
T02818
Name
(RefSeq) ubiquitin fusion degradation protein 1 homolog
KO
K14016
ubiquitin fusion degradation protein 1
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101752645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sita03009
]
101752645
Ribosome biogenesis [BR:
sita03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
101752645
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
Motif
Other DBs
NCBI-GeneID:
101752645
NCBI-ProteinID:
XP_004976563
UniProt:
K3Y8Q9
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Position
VII:27919012..27923914
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AA seq
322 aa
AA seq
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MFYGGYAYHGSTFEQTYRCYPASFFDKPHLEGGDKVIMPPSALDRLASLHIEYPMLFELH
NDATQRISHCGVLEFVAEEGMIIMPYWMMQNMLLQEGDTVRVKNATLPKGTYVKLQPHTT
DFLDISNPKAILEKTLRNFSCLTTGDSIMVAYNNKQYYIDIVETKPASAVSIIETDCEVD
FAPPLDYKEPEKPQQPTIPTSKAAAEVGDTVVEDEPKFKPFTGSGKRLDGRASKLQASEV
PSTAHSVPLDSNKRANQQTSSAPATTSGASNSTRQKTGKLVFGSSASNNKEPQKAPAKEE
EPPKKDELKFQAFSGKSYSLKR
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgttttacgggggatatgcataccatggcagtacgtttgagcaaacgtaccgttgttat
ccagcatccttctttgataagccacaccttgagggtggtgacaaagtaataatgccacca
tctgcccttgatcgcctggcttcccttcacatcgagtacccaatgctatttgagctgcac
aatgatgcaactcaacggatttcacactgtggtgttttggagtttgtggcagaagaaggc
atgatcatcatgccctactggatgatgcaaaacatgcttcttcaagagggtgacactgtc
cgtgtgaaaaatgccacgcttcccaagggtacatatgtgaagttgcaacctcacacaact
gattttctggacatctcaaatccaaaagccatcctggagaaaactctcagaaatttctcc
tgcttaactacgggagatagcatcatggttgcttacaacaacaaacagtattatattgac
attgttgaaacaaagcctgcttcagctgttagcatcattgagacagactgtgaagtggac
tttgcacctccccttgactataaagaacctgagaaaccacagcagcctacaattcccaca
agcaaggctgctgctgaagttggagacactgtagttgaagatgaacccaaattcaaacca
tttactggatccggaaagcggttggatggtagagcctcaaaactacaggcatctgaggtt
ccatccactgcacattctgttcctttggattcaaacaaaagagcaaatcagcaaacatca
tctgcgcctgcaactacttctggagctagcaattccactcgtcagaaaacaggaaagctt
gtttttggttcaagtgcaagcaacaataaagaaccacaaaaggctcctgctaaagaggag
gaacccccgaagaaggatgagctgaagttccaagcttttagtgggaagagctactccttg
aaacgttag
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