KEGG   Setaria italica (foxtail millet): 101752964
Entry
101752964         CDS       T02818                                 
Name
(RefSeq) splicing factor 3B subunit 6-like protein
  KO
K12833  pre-mRNA branch site protein p14
Organism
sita  Setaria italica (foxtail millet)
Pathway
sita03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sita00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101752964
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sita03041]
    101752964
Spliceosome [BR:sita03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    101752964
 Complex B
    101752964
 Complex C
   U2 SnRNP specific factors
    101752964
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_MUD2_C RRM_7 DUF8400 RRM_10 RRM_ACIN1
Other DBs
NCBI-GeneID: 101752964
NCBI-ProteinID: XP_004981308
UniProt: A0A368SCZ0
LinkDB
Position
IX:complement(2283404..2284164)
AA seq 130 aa
MAAVGMRKGNARLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRLGNAKDTRGTA
YVVYEDIYDAKNAVDHLSGFNVANRYLIVLYYQPTKMSKKSDVKKKEEEITRLQEKYGIG
SKTPGPGSSD
NT seq 393 nt   +upstreamnt  +downstreamnt
atggcggcggtgggcatgcggaaggggaacgcgcgtctcccgccggaggtgaaccgggtg
ctctacgtgcggaacctgccgttcaacatctcgagcgaggagatgtacgacatcttcggc
aagtacggcgcgatccggcagatccggctgggcaacgccaaggacacgcgcggcaccgcc
tacgtcgtctacgaggacatctacgacgccaagaacgccgtcgaccacctctccggcttc
aacgtcgccaaccgctacctcatcgtgctctactaccagcccaccaagatgtccaagaaa
tccgacgtcaagaagaaggaggaggagattaccaggctccaggagaagtacggaatcggg
tccaagacccctggccccggctccagcgactga

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