Setaria italica (foxtail millet): 101753158
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Entry
101753158 CDS
T02818
Name
(RefSeq) uncharacterized protein LOC101753158 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sita03041
]
101753158
Spliceosome [BR:
sita03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
101753158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
Motif
Other DBs
NCBI-GeneID:
101753158
NCBI-ProteinID:
XP_004973316
UniProt:
A0A368RL61
LinkDB
All DBs
Position
VI:22548803..22563101
Genome browser
AA seq
1176 aa
AA seq
DB search
MEPEPEAAAAAGALASEAAAPEHHPSQLDVFKNRIRLLRNRTGNFDAWVSLISVAEGTSA
DDIEVISLVYGSFLLEFPLCYGYWIKYAAHKARLCMNRDVVDVYEQAVQAVPHSVDLWVS
YCGFGVCAYEEPADIRSLFERALSLVEKDYLCYHLWDKYIEFESSQKQLIQLAIIYINTL
KFPTKKLHMYYESFRKLVTLLEQEVTSCAAGRLSDKIHTSEMIEAEDSELDISTIIADLF
DQKGGHFSPEALKNYLAAGERLYKRSSKIDKEICCFEASVKRPFFHVKPLDIDQLENWHQ
YLDYVEKNGDFDWAVKLYERCLIPCANYSEFWIRYSEYVDAKGGREIANHALVRASSCFV
KGVPTFCMYYALFKEQIGDASAARSLFVKASSNFTSGFYANINRLANMEKRMGNSKAASK
IYETAIEDAMQKQNIELLQDLYSNFAQFIYAASHSIVEAKEVFVKGINRVPCKPLIKGLI
QFMSTHGGPTEIPLLDSVISNAVTPGSDVSTALSPEDREDISLLFLEFVDLYGGVEELRK
AWARHSKLFPHSTGNMSQHYPTIGNSVQENNKRRKTEHSIVAHDHSLEDIRKLKQTTKTD
NFSLIFDKEVESQVERDIVDSGKGHRDAGEQKALENLDSHEETSRASQECTHSLDKYGMQ
NQMNSFAKEKTDQDLSLHEQNAEKTSHEAQSHEAPVAESGDCNSPSKAIASSESINSQDK
VAVVSARIHREMVCSKSDLPSGSSMPKEGGSSSDPARISPELEERHHVEVQVKLDTEDGL
SVSNANLERSNDSPNTTDCDKVNSALVHESQNHVQSSPAEQLAVCAKPSSSELVNTKADT
LGFQAQLQNQVANSQTHQSNNLSLPVQNIQQQGPSYTMAQNVQTSAQTQDQLFAQSNQGN
QQYLQMTQGYASQMWQYYQQQLYYLQAQHNQQMQSLQQQHLPTEHLQQNFMQQVQQLQQQ
MVLWQQQVQQQQQVVLQQTIPAQQLPDRKQGQHPSSSGDTKHDQNKQQQQAPQMDQQSQQ
LQQQQLLYFQQQQQQQMYLMQQQQQVYQQQQAQQQQQQLFQQQLMQQQQFVLQMPQLQQD
SVQQQQQQQLFQQQQQQMMLLQQQFMQQQMQQYLQQQQNQQGPKDQTYNSNPQDGRTKQM
EHGQQSEASQSDGSKLRSGEQSELSYPSTPQSRSNR
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atggagccggagccggaggccgcggccgcagccggggccctcgcgtcggaagccgcggcg
cctgagcaccacccgtcgcagctcgatgttttcaagaacagaattcgactattacgtaat
aggacgggcaattttgatgcttgggtatcattaatcagtgttgcagagggaacatcagca
gatgacatagaagttataagcttggtatatggtagcttcttattggaatttcctttgtgc
tatggctactggatcaagtatgcagctcacaaggcacgactatgcatgaacagagatgta
gtggatgtttatgaacaagctgtccaagctgtgcctcattctgttgatctttgggtcagt
tactgtggctttggtgtatgtgcatatgaagaacctgctgatatcagaagtttatttgaa
agagctttatctcttgtcgaaaaggactatttgtgctatcacctgtgggacaagtatata
gaatttgaaagttctcagaagcagctgattcagcttgccatcatttatatcaacacactg
aaatttccaacaaagaagctgcacatgtattatgaaagttttagaaagttggtaacatta
ttggaacaagaggtgacaagttgtgctgctggaagattatcagacaagatacatacttcg
gaaatgatagaagctgaagattctgaattggatatatcaactattattgctgacttattt
gaccaaaaaggtgggcattttagtcctgaagcattgaagaattacttagctgctggggag
aggctctacaaaaggtccagtaaaattgacaaagaaatctgttgctttgaggcatccgta
aaaaggcccttttttcatgtcaagccacttgatattgatcagcttgaaaactggcaccag
taccttgactatgttgagaagaatggggattttgactgggctgtaaagctctatgaaagg
tgtttgatcccttgtgctaattattcagagttttggattcgctactcggagtatgtcgat
gctaaaggtggccgagaaattgcaaaccatgctcttgttcgagcatcatcatgttttgtg
aagggagttccaactttctgcatgtattacgcgttgtttaaagagcaaattggtgatgca
tcagctgcacgctctctttttgttaaagcaagcagtaacttcacttcgggtttttatgct
aatatcaataggctggccaacatggaaaaacgcatgggaaacagtaaagcagcttctaag
atatacgagacagccattgaggacgcaatgcagaagcagaacatagagttacttcaggac
ctgtacagcaattttgctcaattcatatatgcggcaagtcatagcattgtggaggctaaa
gaagtctttgtcaagggaatcaatcgtgtaccctgtaaaccactgattaagggactcata
cagttcatgagcacacatggaggacctacagaaatacctcttcttgattctgttatttct
aatgccgtgactcctggatctgatgtatcaacagctttaagccctgaggaccgtgaagat
atctcattgttgtttttggagtttgttgacctttatggaggtgtcgaagaactcagaaag
gcatgggctcggcatagtaaattgtttcctcacagcactgggaacatgtcacagcattat
cctactataggaaatagcgttcaagagaataacaagaggagaaaaacagaacattcgatt
gttgctcatgatcattctttagaagatataaggaaattgaaacagacaaccaaaactgac
aatttttctcttatatttgataaagaggttgagtcacaagtggaaagggacattgtggat
tcaggaaaaggacatagagatgcaggagagcagaaagctttagagaatcttgattcacat
gaagagaccagcagggcatctcaggaatgcactcatagcctggacaaatatggaatgcag
aaccaaatgaattcatttgctaaagaaaagactgatcaagatctgagtttgcatgaacaa
aatgctgagaaaacatctcatgaggctcaaagccacgaagcccctgtagctgagtcaggc
gactgtaattctccttccaaagcaattgctagctctgaaagcatcaattctcaggacaag
gtcgctgtggtatctgcaagaatccatcgtgaaatggtatgctccaaatctgatttgcca
tctggatcaagcatgcccaaagaaggtggaagttcttctgatccagctcgaatatctcca
gagctggaggaaaggcatcatgtggaggttcaggtaaagcttgacacagaggatggtttg
tctgtcagtaatgcaaacctagagaggtctaatgatagcccaaacacaactgactgtgac
aaggtaaactctgctcttgttcatgagagtcaaaatcatgtccaatcttcaccggcagaa
caactcgcagtctgtgcaaaaccttcgagctcagaattagtgaacacaaaagcggatact
ctgggttttcaagctcaactgcaaaaccaggtggcgaattctcaaacgcatcaatctaat
aacctttctctgcctgtacaaaacatacaacagcaagggccttcttatacaatggctcag
aatgttcaaacatctgcacaaactcaagatcaactctttgcacagtccaatcagggaaat
cagcagtatctccaaatgacgcaagggtatgcatcacaaatgtggcagtattatcagcaa
caactgtattacctgcaggctcagcacaatcaacagatgcagagtctgcaacaacaacac
cttccaactgagcatcttcagcaaaatttcatgcagcaagtgcaacagttgcagcagcaa
atggtactttggcagcaacaagtgcagcagcagcagcaagtagtactgcaacagacaatt
ccagctcagcaactccctgacagaaaacagggtcagcatccttcttcttcaggggatacc
aaacatgaccaaaataaacagcagcaacaagcacctcaaatggatcagcaaagccaacag
ttgcagcagcaacagcttctttatttccagcagcagcagcagcaacaaatgtatcttatg
cagcagcagcagcaggtgtaccaacaacagcaagcccagcagcagcagcagcagctcttt
cagcagcagttaatgcagcaacaacagtttgttctgcagatgccacagctacagcaagac
tcggttcagcagcagcagcagcagcaactgtttcagcaacagcagcagcagatgatgctt
cttcagcaacagtttatgcaacaacagatgcaacagtacctgcaacagcaacaaaaccaa
caaggacccaaggaccagacatacaactcaaaccctcaggatggaaggaccaagcaaatg
gagcatgggcaacagtctgaagcttcacagagtgatggttccaaactgcggagtggtgaa
caatctgagttatcctacccgtcaactccacagtcacgctcaaatcgctga
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integrated database retrieval system
