Setaria italica (foxtail millet): 101753275
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Entry
101753275 CDS
T02818
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sita03000
]
101753275
03036 Chromosome and associated proteins [BR:
sita03036
]
101753275
Transcription factors [BR:
sita03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
101753275
Chromosome and associated proteins [BR:
sita03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
101753275
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
Rttp106-like_middle
SSrecog
HMG_box
HMG_box_2
HMG_WDHD1
HMG_box_5
CDC45
YL1
Nop14
Motif
Other DBs
NCBI-GeneID:
101753275
NCBI-ProteinID:
XP_004968491
UniProt:
K3XFH7
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All DBs
Position
V:11248210..11254907
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AA seq
639 aa
AA seq
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MTDGHHFNNILLGGRGGTNPGQFKVHSGGLAWKRQGGGKTIEIDKADVTSVTWMKVPRAY
QLGVRIKDGLFYRFIGFREQDVSSLTNFIQKNMGVTPDEKQLSVSGHNWGGIDIDGNMLT
FMVGTKQAFEVSLPDVAQTQMQGKTDVLLEFHVDDTTGANEKDSLMDLSFHVPTSNTQFV
GDENRPPAHILWETILKFADVGSSEEPVVTFEGIAILTPRGRYSVELHLSFLRLQGQAND
FKIQYSSIVRLFLLPKSNNPHTFVVITLDPPIRKGQTLYPHIVIQFETEVVVERDLALSK
EVLADKYKDRLEESYKGLIHEVFTKVLRGLSGAKVTRPGSFRSCQDGYAVKSSLKAEDGL
LYPLEKGFFFLPKPPTLILHEEIEFVEFERHGAGGASMSSHYFDLLVKLKNDQEHLFRNI
QRNEYHNLFNFINGKNIKIMNLGGDGQGTSGVVTDVLRDTDDDAVDPHLERIKNQAGDEE
SDEEDEDFVADKDDSGSPTDDSGDEDSDASDSGGEKEKSSKKEASSSKPVQKRKPKGRDE
DGPEKKKAKKKKDPNAPKRAMTPFMYFSMAERGNMKSSNPDLPTTEIAKKLGEMWQKMSS
EEKQPYIQQAQVDKKRYEKESAVYRGEAPVDVDSGNDSD
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgacggacgggcaccacttcaacaacatcctcctcggggggcgcggcggcacgaacccc
ggtcagtttaaagtgcattcaggtggacttgcatggaagagacaaggtggaggaaagacc
attgagattgacaaagctgatgtaacctcagttacatggatgaaagtccccagagcatat
caacttggagtcaggattaaagatggcctgttctacaggtttattggcttccgtgaacag
gatgtaagcagtttgaccaacttcatacaaaagaatatgggcgtcacaccagatgaaaag
cagctttctgttagtggtcacaattggggagggattgatatcgatggaaacatgcttacc
tttatggttggtacaaagcaagcatttgaagtgtctctaccagatgttgcacaaacccag
atgcaaggaaaaacagatgttctcttagagtttcatgttgatgatactactggggccaat
gagaaagattcgctcatggatttaagttttcatgtgcctacttcaaatactcagtttgtc
ggggatgagaatcgccctccggctcatattctatgggagactatattgaaatttgctgat
gttggatcctctgaagagccagttgtcacctttgaaggaattgcgattcttacaccaaga
ggacgctatagtgttgagcttcatctgtcatttctacgactccaagggcaagctaatgat
tttaaaatccaatacagcagcattgttcgcctctttcttttgccaaagtcaaataatcct
catacatttgttgttatcactcttgatccaccaatccgtaaaggacaaacattgtatcct
cacattgttattcagtttgagacggaggtagtagttgaaagggatctggcattgagtaaa
gaggttctggctgacaaatacaaagacaggcttgaggaatcttacaagggtctaatacat
gaggtatttaccaaagtccttcgtgggctatctggtgctaaagtcacaagaccaggttct
ttcagaagttgccaagatggatatgcagttaaatcttcactcaaagctgaagatggactg
ttgtatccacttgaaaagggtttcttctttctgccaaagcctcctacactcattctgcat
gaggagattgagttcgtcgaatttgaacggcatggtgctgggggtgccagtatgtcatct
cactattttgatctccttgtcaaactgaaaaatgaccaagagcatctcttcagaaatatt
caaaggaatgaataccacaacctcttcaacttcatcaatggaaagaacataaaaataatg
aaccttggaggagatggtcaaggtacgagtggtgtagttacagatgttctaagggacact
gatgatgatgctgttgacccacatctagagcgcattaaaaatcaggccggggatgaggaa
agtgatgaagaggatgaagattttgtcgcggataaggatgacagtggatctcctactgat
gattctggtgatgaggattcagacgctagtgacagcggtggtgaaaaagagaaatcatcc
aagaaggaagcaagcagttcaaagcctgttcagaaaaggaagcctaagggcagggatgag
gatggtccagagaagaaaaaggcaaagaagaaaaaagatcctaatgctccgaaaagagca
atgacgccgttcatgtatttctcaatggctgagcgaggaaacatgaagagcagcaacccg
gatttgcctacgaccgagattgcgaagaagcttggggagatgtggcaaaagatgtcaagc
gaggagaagcagccttatattcagcaggcccaggttgacaagaaacgctatgaaaaggaa
tccgctgtctatcgtggtgaagcaccagttgatgtggattccggcaatgactctgactag
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