Setaria italica (foxtail millet): 101753549
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Entry
101753549 CDS
T02818
Name
(RefSeq) LOW QUALITY PROTEIN: amino acid transporter AVT1J
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
101753549
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sita02000
]
101753549
Transporters [BR:
sita02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
101753549
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aa_trans
Motif
Other DBs
NCBI-GeneID:
101753549
NCBI-ProteinID:
XP_022682174
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Position
V:complement(27380168..27381902)
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AA seq
437 aa
AA seq
DB search
MEDQKTCQVETPLPVSTLSESLLSGKGADLATADDLEGQLPSYRPTGATFSRTCLNLTNA
VSGIGVLSMPYAVAQGGWLSLALFALVGALCYYTGTLIERCMRADPDAIXXXXXXXXXXX
XXXXRXGIAFFMYVELYLVAISFLVLEGDNLDKLFPGAATDLLGYRLQGKQLFIALAAAV
VLPTTWLKNLGVLAYVSAVGLVASAVLTASLVWAGVAETGFHRNNTSVLNLCGLPTSLGL
FFVCFTGHAVFPTIYSSMKNNKHFSKVLLISSVLCSVNYGLTAVLGYMIYGDDVQSQVTL
NLPSGKLYTKVAILMTLINPLAKYALLTAPITAAIEEKLSLPAGGGTARVAISTVVVVTT
AVVASTVPFFGYLMSFIGSFLSVMATVIFPCLCFLKIYKAEGIRRIEIAAIIGILMIGVF
VAVTGTYTSLQQIIGTF
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccagaaaacttgtcaggtcgagacgccgctgccggtgagcacgctaagcgag
tccctcctgtccgggaaaggcgccgacctcgccaccgccgacgacctcgaggggcagctg
ccgtcctaccgccccaccggcgcgaccttctccaggacgtgcctgaacctcaccaacgcc
gtctcagggatcggcgtgctctcgatgccgtacgcggtggcgcagggcgggtggctgagc
ctggcgctcttcgccctcgtcggcgccctctgctactacaccggcacgctcatcgagcgc
tgcatgcgcgccgaccccgacgccatcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnaacggtagggcattgccttcttcatgtacgtcgagctctacctcgtcgcc
atcagcttcctcgtcctcgagggcgacaacctcgacaagctcttccccggagccgccacg
gacctcctcggctaccggctgcaggggaagcagctcttcatcgcgttggccgccgccgtc
gtgctcccgacgacgtggctcaagaacctcggcgtgctcgcctacgtctccgcggtcggg
ctcgtcgcgtcggcggtcctgacggcgtcgctggtttgggccggcgtcgccgagaccgga
ttccaccggaacaacaccagcgtcctcaacctgtgcggcctgccgacctcgctgggcctc
ttcttcgtctgcttcaccggccatgccgtgttcccgacgatctactcctccatgaagaac
aacaagcacttctccaaggtgctcctcatctcctccgtgctctgcagcgtcaactacggg
ctgacggcagtgctgggctacatgatctacggcgacgacgtgcagtcgcaggtcacgctg
aacctgccatcgggaaagctctacaccaaggtcgccatcctgatgacgttgatcaacccg
ctggccaagtacgcgctgctcaccgcgccaataacggcggcgatcgaggagaagttgtcg
ctcccggccggcggcgggacggcgagggtggccatcagcaccgtggtggttgtcactacg
gcggtggtggcctcgacggtgccattcttcggctacctcatgtcgttcatcgggtccttc
ctcagcgtcatggcgaccgtcatattcccctgcctctgcttcctcaagatctacaaggcc
gaggggattcgccgaattgagattgcggccatcattggtatcctgatgatcggagtgttc
gtagccgtcaccggcacctacacttctctccagcagattataggcactttctaa
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