KEGG   Setaria italica (foxtail millet): 101753690
Entry
101753690         CDS       T02818                                 
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
sita  Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:sita00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sita03041]
    101753690
Spliceosome [BR:sita03041]
 Complex B
  Other components
   Complex B specific factors
    101753690
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WDR55 EIF3I WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd LisH_TPL Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_EML NBCH_WD40 Beta-prop_DCAF4 Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_Nup120_160 Beta-prop_NWD2_C WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_IFT140_1st Ge1_WD40 Beta-prop_NUP159_NUP214 Beta-prop_SCAP Beta-prop_WDR35_TULP_N Beta-prop_Vps41 Beta-prop_SPT8 DUF7165 Beta-prop_VPS8 Beta-prop_WDR75_2nd Beta-prop_WDR19_1st VPS8_N Beta-prop_HPS5 WD40_RFWD3 Beta-prop_IFT122_2nd Mala_s_1-like zf_topless Beta-prop_IP5PC_F Beta-prop_LRRK2 7TMR-HDED
Other DBs
NCBI-GeneID: 101753690
NCBI-ProteinID: XP_004968652
UniProt: K3XGM8
LinkDB
Position
V:complement(13901327..13907029)
AA seq 517 aa
MASSASTLEIEARDVVKIVLQFCKENSLQQTFQTLQNECQVSLNTVDSIDTFIADINAGR
WDAVLPQVAQLKLPRKKLEDLYEQIVLEMAELRELDTARAILRQTQVMGVMKQEQPERYL
RLEHLLVRTYFDPNEAYQESTKEKRRAQIAQAVASEVSVVPPSRLMALIGQALKWQQHQG
LLPPGTQFDLFRGTAAMKQDEEETYPTTLSHQIKFGKKTHPECARFSPDGQYLVSCSVDG
IIEVWDYISGKLKKDLQYQADESFMMHDDAVLCVDFSRDSEMLASGSQDGKIKVWRIRTG
QCLRRLERAHSKGVTSVTFSRDGTQILSTSFDTTARVHGLKSGKMLKEFRGHNSYVNYAI
FTTDGSRVITASSDCTVKVWDTKTTDCLHTFKPPPPLRGGDASVNSVHLFPKNTDHIVVC
SKTSAIYIMTFQGQVVKTFSSGKREGGDFVAASVSPKGDWLYCVGEDMNMYCFSYQSGKL
DHLMKVHDKDVIGITHHPHRNLVATYAEDCMMKIWKP
NT seq 1554 nt   +upstreamnt  +downstreamnt
atggcgtcgtcggcgtccaccctcgagatcgaggcccgcgacgtggtgaagatagtgctg
cagttctgcaaggagaactcgctgcagcagacgttccagacgctgcagaacgagtgccag
gtctccctcaacacggtcgacagcatcgacaccttcatcgccgacatcaatgccgggcgc
tgggatgcggtgctgccccaggtcgcacagctcaagctgccacgcaagaagcttgaggac
ctctatgagcagatcgtgttggagatggccgagctccgagagcttgacacggcccgtgcc
atcctccgccagacgcaggtcatgggcgtcatgaagcaggagcagcctgagcgctacctc
cgacttgagcacctccttgtccgcacatatttcgaccccaatgaggcctaccaagaatcc
accaaggagaagcggcgagcgcagattgctcaagctgttgcttctgaagtctcagtagtc
ccgccatctcggcttatggcattgattggccaggctttgaaatggcagcagcaccaagga
ctattgccgcctggcacgcagttcgatttgttcagaggaactgctgctatgaagcaagat
gaagaagagacataccctactacattatctcatcaaataaagtttgggaagaaaactcat
cccgaatgtgctcgattttcacctgatggtcagtaccttgtttcatgctcagtggatgga
atcattgaagtctgggattatattagcgggaagcttaaaaaggatcttcaatatcaagcc
gatgaaagttttatgatgcacgatgatgctgtgctatgtgttgactttagtagagattct
gaaatgctggcatctggatcacaggacgggaagattaaggtttggcgtatacgaactggc
cagtgcttgcgacgtcttgagcgcgcgcattcgaaaggtgttacaagtgttacattctca
cgtgacggaacccagatattgagtacatcctttgacactactgcgagagtacatggcctc
aagtctggaaagatgctgaaagaattccgaggtcataattcctatgtgaattatgccatc
tttacaactgacggtagccgtgttattacagcttccagtgattgtactgttaaggtctgg
gatacaaaaacaactgattgcttgcatactttcaagccaccacctcctttgaggggagga
gatgcatctgttaattctgtccatctatttcccaaaaatactgatcacattgttgtctgt
agtaagacttcagcaatatacatcatgacttttcaaggacaggttgtaaagactttctca
tcaggtaaacgggaagggggagattttgttgcagcttcagtttccccaaaaggagactgg
ttgtattgtgttggtgaagatatgaacatgtattgctttagctaccagtctggtaaactg
gatcatctaatgaaggtccatgacaaggatgtcataggaattacgcaccatcctcacagg
aatttggttgccacctatgccgaagattgtatgatgaagatatggaagccctga

DBGET integrated database retrieval system