Setaria italica (foxtail millet): 101753800
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Entry
101753800 CDS
T02818
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sita04131
]
101753800
04121 Ubiquitin system [BR:
sita04121
]
101753800
Enzymes [BR:
sita01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101753800
Membrane trafficking [BR:
sita04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
101753800
Ubiquitin system [BR:
sita04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101753800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_11
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
Rad50_zn_hook
zf-RING_5
Zn_ribbon_6
zf-Nse
DUF7129
zf-C2HE
DUF7410
HypA
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
101753800
NCBI-ProteinID:
XP_004984362
UniProt:
K4ADF7
LinkDB
All DBs
Position
IX:46268551..46270677
Genome browser
AA seq
285 aa
AA seq
DB search
MSGGRQSYWCYQCRQRIRPRGREMVCPYCDSGFVAEMDDVDALMNHFVGMDPDFQRDPRF
GIMEAISAVMRHGMTGMNREVDVRGRPNIFSDLEMEFGSGPWLLFRGQLPGHLTEDNGFD
VFINGRRGVGMRRANIADYFVGPGLDDLIEQLTQNDRRGPPPAAQSSIDAMPTVKITQRH
LSGDSHCPVCKEKFELGSEAREMPCNHLYHSDCIVPWLEQHNSCPVCRYELPTQGSATGA
SCSRTRSTNQSQSSSSSSSSGRTSGRQRRRNPFSFLWPFRSSSSR
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtggcaggcaatcatactggtgttaccaatgccgacagcggataaggcctcgt
ggccgggagatggtgtgtccttactgtgattccgggtttgtggctgaaatggatgatgtt
gatgctctcatgaaccacttcgttgggatggatcctgatttccaacgtgacccaaggttt
gggataatggaggcaatctccgctgtgatgcggcatggtatgactgggatgaacagggag
gttgatgttagaggaaggccaaacatcttttcagacctagagatggagtttggctcaggg
ccatggctgctcttccgtggccagctccctggtcatctcacagaggataatggtttcgat
gtgttcatcaatggacggcgtggtgttggcatgaggagggcaaacattgcagactacttt
gttgggcctggattggatgatctcattgagcaattaactcagaatgatcgtcgtggacca
ccccctgccgcacagtcctcgattgatgctatgcccacagttaagatcactcagaggcat
ctaagtggagactcacactgccctgtctgtaaggagaagtttgagttgggatcagaagca
agagagatgccatgcaaccatttgtaccactctgattgcatagttccttggctagagcag
cataattcctgccctgtttgccgttacgagcttccaacacagggttctgctactggagct
agctgctcacgcacaagatcaacgaaccaaagccagagctcaagtagttcaagcagcagt
gggagaaccagtgggcggcaaaggagaaggaacccgttctcgttcctgtggcctttccgc
tcatcaagttctcgctag
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