KEGG   Setaria italica (foxtail millet): 101754471
Entry
101754471         CDS       T02818                                 
Name
(RefSeq) pre-mRNA-processing factor 17
  KO
K12816  pre-mRNA-processing factor 17
Organism
sita  Setaria italica (foxtail millet)
Pathway
sita03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sita00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101754471
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sita03041]
    101754471
Spliceosome [BR:sita03041]
 Complex C
  Other components
   Step II factors
    101754471
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_IFT122_1st WD40_CDC20-Fz WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_EML_2 WD40_WDHD1_1st EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML WD40_RFWD3 Beta-prop_SPT8 Beta-prop_WDR75_1st DSE1_N Beta-prop_RIG_2nd ASA1 WDR90_beta-prop_4th PAC11 Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_WDR41 Beta-prop_Aladin Beta-prop_EIPR1 Beta-prop_VPS8 Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_NOL10_N CFAP251_N Beta-prop_IFT140_1st TRM82_WD eIF2A Beta-prop_Vps41 Beta-prop_ACSF4 Beta-prop_NWD2_C Beta-prop_SCAP
Other DBs
NCBI-GeneID: 101754471
NCBI-ProteinID: XP_004984098
UniProt: K4A7Q3
LinkDB
Position
IX:complement(43422061..43425296)
AA seq 572 aa
MDLLQSSYSPDDASSPEESAAASSPDSSPLRLPSKSAAPAVDDTALALSAAASASRPLDP
SLHLVAFNPTADQLWAPIVGPQHPHAPISSASGNRNHKLGHVEDAAVLPFLFDEQYNTFH
RFGYASDPSGLHIVGDAQSQAPEPDTVYNLAPSEHKRRRLLAKADNQEEPLPPDARNPAS
EEWILHNKQSPWAGKKEAPPAELTEEQKQYAEAHAAKKAEKEARGEGKGERAEVVVKSTF
HGKEERDYQGRSWITPPKDAKASNDHCYIPKRCVHEWVGHTKGVSAIRFFPKYGHLLLSA
SMDCKIKIWDVLGSRTCMRTYMGHSKAVRDISFSNDGTKFLSAGYDRNIQYWDTETGQVI
STFSTGKVPYVVKLNPDEDKQHILLAGMSDKKIVQWDMKSGQITQEYDQHLGAVNTITFV
DNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSIALHPNSNWLAAQSLDNQILI
YSTKERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGSCWFWDWKSCRRFKTLK
CHNGVCIGCEWHPLETSKVATCGWDGVIKYWD
NT seq 1719 nt   +upstreamnt  +downstreamnt
atggatctcctccagtcctcgtactcgccggacgacgcctcctcgccagaggagtcggcg
gccgcttcctcgccggactcctccccgctccgcctcccctccaagtccgccgcccccgcc
gtcgacgacaccgcgctcgcgctctccgccgccgcctcggcctcccgcccgctcgacccc
tctctccacctcgtcgccttcaaccccaccgccgaccagctctgggcgccaatcgttgga
cctcagcacccccacgcccccatctcctccgcctccggcaaccgcaaccacaagctgggc
cacgtcgaggacgccgcggtactgcctttcctcttcgacgagcagtacaacaccttccac
aggttcggctacgcatccgacccctccggcctccacatcgtcggcgacgcgcagtcgcag
gcgcccgagcccgacaccgtctacaacctcgccccctccgagcacaagcgccgccgcctc
ctggccaaggcggacaaccaggaggagccactgcccccggatgccagaaatccggcctcc
gaggagtggatcctccacaacaagcagagcccctgggctggcaagaaggaagcgccgccc
gcggagcttactgaagagcagaagcagtatgccgaggcgcacgcggccaagaaggcagag
aaggaggctcgcggtgaagggaagggtgagagggcagaggtggtggtcaagagcaccttc
cacgggaaggaggagagagactaccaggggaggtcctggatcacaccacccaaggatgcc
aaggccagcaacgaccactgctacatccctaagaggtgtgtgcatgagtgggtcggccac
accaaaggggtttcagccatcagatttttccccaagtatgggcatctcttactgtctgcg
agtatggattgtaagattaagatctgggatgtgctcgggtcgcggacatgtatgcgcaca
tatatgggtcactcaaaggcagtgagggatatttcgttctccaatgatgggaccaaattc
ttgagtgctgggtatgacaggaacatacagtactgggatactgagacagggcaggtgatc
tcgaccttctcaaccgggaaggtcccatatgttgtgaagctgaatcctgatgaggataag
cagcatattcttcttgccggaatgagcgacaagaagattgtgcaatgggatatgaaatca
gggcagataacacaagagtacgatcagcatttaggggctgtgaacaccataacatttgtc
gataataacaggaggtttgtgacatcgagtgatgacaagtctcttcgtgtttgggagttt
ggcatccctgtggtgattaagtatatcagtgagccacacatgcactcaatgccatcgatt
gcgctgcacccaaactctaactggctggcagcacagagcttggacaatcaaatactgata
tacagcaccaaggagaggttccaactcaataagaagaagcgatttgctggccacattgta
gcaggttatgcttgtcaggtgaacttctcacctgatgggagatttgtgatgtcaggtgac
ggtgaaggtagctgctggttctgggattggaaaagctgcaggaggtttaagacattgaag
tgccacaatggggtctgcattggatgtgagtggcatccgttggaaactagcaaggttgca
acatgtggatgggatggtgtaattaaatactgggattga

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