Setaria italica (foxtail millet): 101754500
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Entry
101754500 CDS
T02818
Name
(RefSeq) F-box protein SKP2A
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101754500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sita04121
]
101754500
Ubiquitin system [BR:
sita04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
101754500
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GFIT
Motif
Pfam:
DUF7885
LRR_6
LRR_At5g56370
LRR_4
F-box-like
LRR_14
F-box
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
101754500
NCBI-ProteinID:
XP_004970783
UniProt:
K3XIY7
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Position
V:complement(43057097..43060986)
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AA seq
379 aa
AA seq
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MDSTKPLGGELNNSLDTLMVSSGVESKQAQNAGTETSLTGWKDLPMELLLRIMSLVGDDS
MVIVASGVCTEWRDALGWGIANLSLSWCQDHMNDLVISLAHKFTKLQVLSLRQIKPQLED
SGVEAVANYCHDLRELDLSRSFRLSDRSLYALAHGCPHLTRLNISGCSNFSDAALVFLSS
QCKDLKCLNLCGCVRAASDRALQAIACNCGQLQSLNLGWCDGITDKGVTSLASGCPELRA
LDLCGCVLITDESVVALANGCPHLRSLGLYYCQNITDRAMYSLAANSRVRSQGRGWDAAK
RGSGKDRDRDGLASLNISQCTALTPPAVQAVCDSFPALHTCPERHSLNISGCLSLTSVHC
ACALHPHRAGRAILSNHAY
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggatagcacgaagccactgggaggggaattgaacaattcgctggatactcttatggtt
tctagtggtgtggagagtaagcaggctcagaatgctggcaccgaaaccagcttgacaggt
tggaaagaccttcccatggagctgctcctgcggattatgtcattagttggagatgatagc
atggtcatcgtggcctctggtgtatgcacggaatggcgtgatgcgttaggttggggaatt
gcaaatctttcactatcatggtgccaggaccacatgaatgacttggtgatatctctggct
cacaaattcacgaagcttcaagttctatctctacggcagatcaaacctcagctcgaagac
agtggtgtggaagctgtggcaaactactgccacgatctgcgggaactggatctcagcaga
agctttaggcttagtgacaggtccttgtatgctctggcacatgggtgccctcacctcaca
aggctcaacatcagcgggtgctccaatttcagtgacgctgctttagtgttcctcagtagc
cagtgcaaggatctcaaatgcctgaatctgtgcgggtgtgtgagggcagcttctgacaga
gcgcttcaggccatcgcttgtaactgtggccagctgcaatcgttgaacctgggctggtgc
gatggcatcactgacaagggagtgaccagcttggcgtcagggtgccctgaactccgggct
ttggacttgtgtggctgtgttctcatcacagatgagagcgtagtggcgctagcgaacggc
tgccctcacctgcgttccctggggctgtactactgccagaacatcacggaccgcgccatg
tactcgctggccgccaacagccgcgtgaggagccagggccggggctgggacgcggcgaag
aggggcagcggcaaggaccgggaccgggacgggctagcgagcctgaacatcagccagtgc
acggcgctgaccccgccggcggtgcaggccgtgtgcgactcgttcccggcgctgcacacg
tgcccggagcggcactcgctcaacatcagcgggtgcctcagcctcacctccgtgcactgc
gcctgcgccctccacccgcaccgcgccggccgtgccatcctctccaaccacgcctactga
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