Setaria italica (foxtail millet): 101754766
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Entry
101754766 CDS
T02818
Name
(RefSeq) UV-stimulated scaffold protein A homolog
KO
K23720
UV-stimulated scaffold protein A
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
101754766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sita03400
]
101754766
DNA repair and recombination proteins [BR:
sita03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
101754766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
SMC_Nse1
IMS_C
Motif
Other DBs
NCBI-GeneID:
101754766
NCBI-ProteinID:
XP_004952280
UniProt:
K3YQE2
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All DBs
Position
I:12421013..12423528
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AA seq
710 aa
AA seq
DB search
MPRSTVSSSFAGHRTPAAEAEMGSNPSSSAAAAAESSMASLIERATSTTAPAVDPVLLRA
IKSSGRASDGAIRDAFHLLLSLMSKPHSHVRLLAFSVADELFMRSKLFRSLLTDALDGFL
PLAVGFRRAHPLPPPAASAGLLRKAAVQALERWHHLFGAHYRQLRLAVEYLKVSARVQFP
GLRATVEARAAREARTQEILTAKVEQLRQSLASIKAEIRSTMDEIRNGLEIIRAEYEKFE
GYVNDDDDAEQEIASLSMRSIRMASLMAGEWLPETQENEAVFDALREAYRLLVSKHLVTV
QEWISVLVRVNLQDNRFRDSALKEFIDVKNEIRAVRDRCSELGLDLDNVRRRKGDQEEED
DEFWVEGNIEAPSPAKVQSSVDVASTSRDTGKGKKVVGGVKSDIGKAPVAGNGTRNLDPE
KSKLFAEAPVVPWSSVLDRWGSSGDAHVNQRGLELESHWGRVDNDAVIPAAKIAELNVHS
SVYREAPVEILPCHAPLKKGGLCQRRDLKVCPFHGPIVPRDAEGNPFEQHSGSFGAEVDP
VEHCDIRGNSNELNGNRDGDYMEEASSSRMTDISNDYGNIAGTHDLGNVTVELARQAIKN
VRKRDMDHKARERAQRQRIRQHNEDVLREAAIASTSYSAAAYEQPPESWGRRGRRGKAKA
PTLASMLKKKVTSKDRIAERLLNTRATDATIREASHDEDMSYREAFPNQW
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgatcgacagtctcctcctccttcgccggccaccgcactccggcggccgaagca
gagatgggctcgaacccctcctcctccgctgccgcggcggcggagtcctccatggcgtcc
ctcatcgagcgcgccacctccaccaccgcgcccgccgtcgacccggtcctcctccgcgcc
atcaagtcctcgggccgcgcctccgacggcgccatccgcgacgccttccacctcctcctc
tccctcatgtccaagccccactcccacgtgcggcttcttgccttcagcgtcgccgacgag
ctcttcatgcgctccaagctcttccgctccctcctgaccgacgcgctcgacggcttcctc
ccgctcgccgtagggttccgtcgggcgcacccgctcccgccgccggccgcctcggcgggg
ctcctccggaaggccgccgtccaagcactcgagcgctggcaccacctcttcggcgcgcac
taccgccagctccgcctggccgtcgagtacctcaaggtgtccgcccgcgtccagttcccg
ggcctacgggccaccgttgaggctcgagcagcccgcgaggcacgcacgcaggagatcctg
accgccaaggttgagcaattgcgtcaaagcctcgcttcaatcaaggctgaaatccggtcc
acgatggatgagattcgcaatgggttggagatcatccgtgctgaatatgaaaaatttgag
ggctatgtgaatgatgatgatgatgcagagcaggagattgcatccctgtcaatgcggagt
attagaatggcttcattgatggctggggagtggttgcctgagactcaggagaacgaagca
gtttttgatgccctgagggaagcgtaccggctgcttgtgtcaaagcatctggtaactgtc
caggagtggatatctgttcttgtaagggtcaatcttcaagataaccggttcagagattct
gcactgaaggagttcattgatgttaagaatgagatacgggcagtgagagatcggtgcagt
gagcttggactcgaccttgacaatgttcgtaggaggaagggtgaccaagaggaagaggat
gatgagttttgggtggagggaaacatagaggcccctagtcctgccaaagtccagagcagt
gtagatgttgcaagcaccagccgggacaccggaaagggaaagaaggtggtgggtggagtg
aaatctgatattggcaaggcgccagttgctggtaatggaactaggaatcttgacccagag
aaatcaaagctctttgctgaagcccctgtggtgccatggagctctgtcttggatcgttgg
ggctccagcggggatgcacatgtaaaccagagagggcttgagctcgagagtcattgggga
agggtggataatgatgccgttatacctgcagcaaaaattgcagagttgaatgttcatagc
tcagtttatagagaagccccagttgagatcctaccatgtcatgccccactaaagaaagga
gggctttgccagagaagggatcttaaggtctgtccttttcatggaccaattgtcccacgt
gatgctgaaggaaatccatttgagcagcacagcggtagttttggtgctgaagtagatcct
gttgagcactgtgacataagaggaaactcaaatgagctgaatggaaacagagatggtgat
tatatggaggaggcctcttcttcaagaatgacagacataagtaatgactatggaaatatt
gctggaactcatgatctaggtaacgttactgtagagctggcaagacaggcaattaaaaat
gtccggaaaagagatatggatcataaggcccgggaaagagcacaacgccagagaatccgt
cagcacaatgaagacgttctgcgggaggcagctattgcttcaacttcctactctgcagca
gcctatgagcagcctccagaatcatggggtcgacggggtcgccgaggtaaggcaaaagca
ccaacgctggcatcaatgctgaagaagaaagttaccagcaaggatagaattgcagagagg
cttctgaacactcgagccacagatgcgacaataagagaggcttctcatgatgaagatatg
agctacagggaagcatttccaaaccagtggtaa
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