Setaria italica (foxtail millet): 101754800
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Entry
101754800 CDS
T02818
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 27 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sita01002
]
101754800
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sita04131
]
101754800
04121 Ubiquitin system [BR:
sita04121
]
101754800
Enzymes [BR:
sita01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
101754800
Peptidases and inhibitors [BR:
sita01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
101754800
Membrane trafficking [BR:
sita04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
101754800
Ubiquitin system [BR:
sita04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
101754800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
101754800
NCBI-ProteinID:
XP_004975621
LinkDB
All DBs
Position
VII:20128111..20133600
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AA seq
515 aa
AA seq
DB search
MGKFMHDSPLVSHSEVNRRHYNLAAVAVGLGLGVAGLCKALHSGLSIPWVSPRNLFLGSG
RVYYVGGLRNLGNNCFLNVILQALASCDSFVSFLDNLLATDGLLPEEKVERMPLLLALSS
LLEDLSTVRDERIVLNPQGVMHALSFYVSHFNLTRQQDASEAFLHLLISLRDEFSHCYVP
HRSSLADITLSHSKVYRQREGNEPECKRWKQNLFGPFDGTIGSILSCRNCSSVLSLDFQN
FQCLPLSPVLNTDGDVTNGCSLVDCLKYFTVVEHLDNYRCDRCWHITAAKYLSLKSEADE
EKVTKLNTCVDSGTCSCRGMFPPEEIPCSSSSRATKQLIISQCPKILCIHLLRASVRFDG
EPIKHKGHISFPLLLNLSPFAGGASSTGLGPGPLAVNMQRDGQQALHLYRQLNMQISLNA
NVDVASSSSSSPQQSPSSRSKLYGLSAVVEHYGKCGGGHYAVYRRVASNPDHDDPGQPLA
GLAKRWFYISDGHVSEVSEDDVLAAEATLLFYERL
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggggaagtttatgcatgacagtccactggtatctcatagtgaagtaaacaggcgtcac
tacaatcttgcagccgttgctgttggcttgggactaggagttgctggcttgtgcaaggca
ttgcatagtggtttgtccataccatgggtttctccgaggaatttatttttgggatcaggg
agagtatactatgttggaggtctacgaaatcttggcaacaattgctttcttaatgtcatc
ctgcaggcacttgccagctgtgatagttttgtttcctttctagataatttgcttgcaact
gatggcttactacctgaagaaaaggtcgaaagaatgcctcttcttcttgctctaagttct
ctcttggaagacttgagcacagttcgagatgaaagaattgtgttgaatccacaaggagta
atgcatgctttgagtttctatgttagtcacttcaatttgaccagacagcaggatgcttcg
gaagcttttcttcatcttttgatctcactgcgggacgaattttcccattgttatgtacca
cataggagttctctggcagacatcactctgtctcactctaaagtatataggcaaagggaa
ggtaacgagcctgaatgcaagcgctggaaacaaaatctatttggcccctttgatgggaca
attggcagcatattgtcatgcagaaactgttcatctgtgctatcgttggacttccagaat
ttccaatgcctgcctctctcaccagtgcttaatacagatggagatgttaccaatgggtgt
agtttggtggattgcctaaagtacttcactgtggtggagcatcttgacaattatcgctgt
gatcggtgttggcatattactgctgccaagtatctatctcttaaatcagaagctgatgag
gaaaaagttaccaaacttaacacctgtgtcgactctggcacttgcagttgcaggggtatg
ttccccccagaggaaataccatgttcatcatcttcacgagcaacaaagcagttgattatc
agtcaatgtccgaagattttgtgcattcatttactacgtgcttcagtcagatttgatggt
gagcccatcaaacataagggacatatttcttttcctttacttctcaatctatccccattt
gcgggaggtgcatcaagcactgggctggggcctggacctttggcagtgaacatgcaaaga
gatggccagcaagccctccatctatatcgacaactgaatatgcagataagcctaaatgca
aatgttgatgtggccagtagttcatcatcatcaccacagcagtcaccatcatcaaggagc
aagttatatggtctttcagctgtcgtggagcactacgggaaatgtggaggagggcactat
gccgtttacaggagagtcgcatcaaatcctgatcatgatgatccagggcaacctcttgca
ggtctagccaagcggtggttttacatttcagatggtcatgtatcagaagtttcagaggat
gatgttttggctgcggaggccaccctccttttctatgaaagattgtag
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