Setaria italica (foxtail millet): 101754802
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Entry
101754802 CDS
T02818
Name
(RefSeq) KH domain-containing protein HEN4
KO
K21444
poly(rC)-binding protein 3/4
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sita03019
]
101754802
Messenger RNA biogenesis [BR:
sita03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
101754802
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_5
MOEP19
KH_Vigilin
Gp_dh_C
Motif
Other DBs
NCBI-GeneID:
101754802
NCBI-ProteinID:
XP_004957252
UniProt:
K3ZRI8
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Position
II:36291566..36295967
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AA seq
623 aa
AA seq
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MEAVPTPAGAGGAASSSSSSSTPSPSTKRPTTTLRLLCPSSRAAALRPSRDLHVDHPPVG
DEAVLVISGPDAPAAAVRAWERVVGHRVGGDEAMGGEEEEREVTGAVGCRMLAAGAQVGC
VLGKGGKTVERMRQESGAQIRVFRNREQLPPCAGPGDELIHISGSFSQVRKGLLAVSTCL
QDNPRPDTSNIPMSRPFGPPVSGTGCPPGMDPHSQRNYLPPHIPDYHTRNYPSNAGAPGP
RFLFEQEIVFRMIILNEMVGSIIGKGGSTIRALQSETGASIKILEPVADSEERIVSISAR
ENSDMMHSPAQDAVVRVYSRISESSIDRNSPTPARLLVPSQHIGCLLGKGGSIITEMRKL
TGASIRIFGNEQIPRCAQRNDEMVQVTGSFQSIHDALLHITGRIRDVIIPKPHPSGGMPP
YPPAGNISLHQPRQEPPPPHPHHSGGMPPYPMHSFRPDAPMGPFETGGHRPPPAHSMEHM
GADRMPYSYGCEQGGPRPFLEQPSPRSWASEAPNTNSEAPRNMPDAVRSKDFRKGPVAGE
NQVATPTSTTTEVAIPCKYIGFVCGTNGSDIAEIKKMSGASITVHDPKPGDANSTIVIVG
DPEQTKKAQSLIHAFIFCGLCQT
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggaagccgtccccaccccggccggcgccggcggcgccgcttcctcctcctcctcctcc
tcgaccccttcaccctccaccaagcgcccgaccaccacgctccgccttctatgcccctcc
agccgcgccgccgcgctccgcccctcacgggacctccacgtggaccatccgcccgtgggg
gacgaggccgtgctcgtcatctccgggccggacgcccccgccgcggcggtcagggcgtgg
gagcgcgtggtgggacacagggtcgggggcgacgaggcgatgggaggggaggaggaggag
agggaggtgacgggcgccgtcggctgccggatgctggccgccggcgcgcaggtggggtgc
gtgctggggaagggcgggaagacggtggagcggatgcggcaggagagcggagcccagatc
agggtgttccggaacagggagcagctgcctccctgcgccgggccgggggatgagcttatc
catataagtgggagcttttctcaagtacggaaaggactgcttgcagtttcaacctgtctc
caagataatcctaggccagacacaagcaatattccaatgtctagaccatttgggcctcca
gttagtggtactggttgtccccctggcatggatcctcattctcaaagaaactatttacca
ccgcacattcctgattaccacacaaggaattatccaagtaatgctggtgcccctggacct
agattcttatttgaacaagagatagtgttcaggatgataattctgaatgaaatggtgggc
agcataattggaaaaggcggttccactatccgcgcattacagagtgaaactggtgcttct
ataaagattttagagcctgttgctgattcagaggagcgtatcgtttccatatctgcgcgc
gagaattctgacatgatgcattctccagctcaagatgcagttgtccgggtctactctagg
atctcagagtcatctattgatagaaattcacctacacctgcaaggcttcttgttccgtca
caacatattggttgcctgctagggaaaggcggatccattattacagagatgagaaagcta
acaggagctagcattcgaatttttgggaatgaacaaattccaagatgtgcacagcgaaat
gatgagatggttcaggtcactggtagcttccaatccatccacgatgcattacttcatatc
actggaaggattagggacgtcatcattcccaagccacaccccagtggaggcatgcctcca
tatccacctgctggaaacatctctcttcaccaaccaagacaagaaccacctccgccacac
ccacatcacagtgggggcatgcctccatatcctatgcattctttcagacctgatgctcct
atgggtccctttgaaacgggtggtcatcggccacctcctgcgcattcgatggaacatatg
ggtgctgataggatgccatactcatatggttgtgaacaaggaggtcctcgtccttttttg
gaacagccgtcaccaagatcctgggcttctgaggcaccaaatacaaacagtgaagctcca
agaaatatgcctgatgcggtgcgatccaaagattttagaaagggaccagtggcaggtgaa
aatcaagtggctacgccaactagtacaacgactgaagttgctattccttgcaagtatata
ggctttgtttgtggaaccaatggcagtgatattgcagagataaaaaagatgtcaggggct
tcaattacagttcacgatccgaaacctggtgatgcaaattcaacaattgttattgttggg
gacccggagcaaaccaagaaggcacagagcttgattcacgccttcatcttctgtggttta
tgtcaaacctga
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