Setaria italica (foxtail millet): 101755033 Help Entry 101755033         CDS       T02818                                  Name (RefSeq) THO complex subunit 2   KO K12879   THO complex subunit 2 Organism sita  Setaria italica (foxtail millet) Pathway sita03013   Nucleocytoplasmic transport sita03040   Spliceosome Brite KEGG Orthology (KO) [BR:sita00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     101755033   09122 Translation    03013 Nucleocytoplasmic transport     101755033  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:sita03019]     101755033    03041 Spliceosome [BR:sita03041]     101755033 Messenger RNA biogenesis [BR:sita03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      101755033 Spliceosome [BR:sita03041]  Complex C   Other components    EJC/TREX     101755033  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     101755033 SSDB OrthologParalogGFIT Motif Pfam:  Tho2 THOC2_N Thoc2 Motif Other DBs NCBI-GeneID:  101755033 NCBI-ProteinID:  XP_004971053 UniProt:  K3XDQ7 LinkDB All DBs Position V:complement(44726396..44743523) Genome browser AA seq 1774 aa AA seqDB search MSPPLQAPDYKHITEECLREWKGQSAGAFRLPDPIPMARFLYELCWAIVRGDLPPQKSRV ALDSVVFVEEARREEELGSVLADIIAHLGQDITISGEYRNRLVKMTKSFVESSITAPRLL QERCEEDFLWEVEQSKLKGQDLKSKEVRVNTRLLYQQTKFNLLREESEGYAKLVTLLCQV GSDLACQNSSSVTISIIKSLIGHFDLDPNRVFDIVLECFEVYPDSNIFHQLIPLFPKSHA AQILGFKFQYYQRLDVNSPVPSGLFRTAALLVKSGFIDLDNVYSHLLPNDDEAFEHFDSF SSRRIDEANRIGKINLAATGKDLMDDEKQEITIDLYTALEMENDTVGERAPEMEKNQKLG LLLGFLSVHDWYHAQVLFERLAHLNPVEHIEICDGLFRMIEKAMSSAYDVVCQLYYYLPP KNGADQTDTSALSLSSFDLPKEFFQMLTACGPYLHRDTQLLQKVCRVLKAYYHSSKESTR ATSVVSPEFRIEEALGSCLLPSLQLIPANPAVDMEIWGVLSLLPYETRYRLYGEWEKETE QNPIVLAARQTAKLDTRRLLKRLAKENLKPLGRMVAKLAHANPMTVLRTIVQQVEAYRDM ITPVVDAFKYLTQLEYDILQYIVIERLAQGGRAKLKDNGLNLSDWLQCLASFWGHLCKKH NAVELRSLLQYLVNQLKKGVGIELVVLEELIQQMANVQYTENMTEEQVDAMAGSETLRQQ ASLFGATRNYKVLSKSTNRLRDSLLPKEEPKLAVPLLLLIAQHRSKIIINADATYIKMVS EQFDRCHGILLQYVEFLSSAVTPIAYAQLIPPLQDLVHKYHIEPEVAFLIYRPVMRLFKS TSGGDTCWPLDDNEEGESVSSDDLILHPDLSQEPIMWSDLINTVRSILPAKAWNSLSPDL YATFWGLTLYDLHFPKDRYDTEIKKLHDNLKQLEDSSDNSSIAISRRKKDKERIQDLLDK LNSESQKHQQHIASVVQRLAREKDKWLSSSPDALKINMEFLQRCIFPRCVFSTQDAVYCA TFVQTLHSLGTPFFNTVNHIDVLVCKTLQPMICCCTEFEAGRLGRFFHDTLKMAYYWKSD ESVYERECVNKPGFAVYFRYPNSQRVSYSQFVRVHWKWSSRITKVLNQCMESKEYMEIRN ALIVLTKISSVFPVIRKSGVNLEKRVAKLKGDEREDLKVLATGVAAALAARKSSWLSEEE FGMGHIDLKPATARSAHGNQSTDPSMAKDQNARAKSIESRHEKSEAAMKPDVQQKKSSVS ANGSDNQIPSSSIQGKSSGTVRVADEPPKPVSDEGVKVSARPTSESETRVPQKRAAHSTG KILKHDVAKEDAKTGKSSSRNVNQQASTAPVDREPLSQAADFVQDTNSTSSNGNLHPAPR KVSSSSQRNAALNGAANPSGEANELTDSTLRQQKRLAPAEEQDRSSKRRKGETEPRDSDL SEHHVDKEKSLDSRAVDKFRSVDHEKSTNEEQNLSRAEKIREKFDDKYDRDPREKLDRAE RRRGEDAIDRSTDRLSDRRERSIERMQDRVTDKAPEKGREDRNKDERNKGKYAEPSVDRT HSTDERFRGQSLPPPPPLPTSFVPQSVGANRREEDADRRGGSARHIQRSSPRRDEKERRQ SEENASSFQDDGKHRREEDLRDRKREDRDVPSNKVDDRDREKGTTTKEDSDPSSASKRRK VKREQPSLEAGEYAPSAPQLPSHGTGSSQLSDVRERERKGVISQHRSSHTDDLPRTHGKD TTSKPSRREAEQMHDREWEEEKRPRTETKRKHRK NT seq 5325 nt NT seq  +upstreamnt  +downstreamnt atgtcgccccctctgcaggcgcccgactacaagcacatcacggaggagtgcctccgcgaa tggaagggccagtccgctggcgccttccggctccccgatccgatccccatggcgcgcttc ctctacgagctctgctgggcgatcgtgcggggcgacctgccgccgcagaagagccgggtc gcgctggattcggtggtgttcgtcgaggaggcacggcgggaggaggagctcggctcggtg cttgctgatatcatcgctcaccttgggcaggatattacaatctctggtgaatatcgcaac cgtcttgttaaaatgactaagtcatttgtcgagtcctcgattaccgcacctaggcttctg caagagcgatgcgaagaagatttcctttgggaggttgaacaaagtaagctgaaaggccag gatttaaaatccaaggaggttagggtcaacacacggcttctttaccagcaaactaaattc aacctcttacgggaggaaagcgagggctatgccaagttggtgacactcctttgtcaagtt ggctcagatctggcttgccagaattcttcttcagttacaatcagcattataaagtcattg atcggtcattttgatctggacccaaatcgtgtattcgacattgtgttggagtgctttgaa gtctatccagatagtaacatctttcatcagctcattcctctttttcctaagtcccatgca gctcaaattttggggttcaaatttcagtactatcaacgattggatgtcaacagccctgtt ccatctgggcttttcagaacagcagctttattggtcaaatctggtttcattgaccttgat aatgtctattctcacttgcttccaaatgatgatgaggcatttgagcattttgattctttc agttcaagaagaattgatgaggctaatagaattggcaaaatcaatcttgctgctactgga aaggaccttatggatgatgagaagcaagaaatcactatcgatttgtacacagcgttggag atggaaaatgatacagttggggagcgagcacctgagatggaaaagaaccagaaacttggg cttcttcttggttttctctctgtgcatgactggtaccatgcacaagtactctttgagcgt cttgcacacctaaatcctgttgagcatattgaaatttgtgatggattattcagaatgatt gaaaaggcaatgtcttcagcctatgatgtagtttgtcaactgtattactacttacctcct aagaatggtgctgaccagaccgacacatctgccctgtccttaagttcatttgatctacca aaagagtttttccaaatgctcaccgcttgtggaccatatcttcatcgcgatactcaatta cttcaaaaggtttgcagagtattaaaagcatactaccactcatcaaaagagtcaacccgt gccacaagtgtagtttcaccagaatttcggattgaagaggcacttgggtcatgcttgctt ccttcgttgcagctcatccctgctaatcctgctgttgatatggagatatggggggttctt tcccttcttccttatgagacccgctatcgtctgtatggtgaatgggagaaggagactgaa caaaacccaattgtccttgctgcaaggcaaactgcaaagctggacaccagaaggctccta aaacggctggctaaggaaaacctgaagccgctaggccgaatggttgctaaacttgctcat gcaaatcctatgactgtgctccggacaattgtccaacaggtcgaagcatacagggatatg atcacgccagttgtggatgcttttaagtacttgactcagctggagtatgacatcttgcaa tatattgtaattgaacgcttggctcaaggtggtcgtgcgaaactcaaagacaatggcctt aatctgtcagattggcttcaatgtcttgcatctttttggggccacctgtgcaagaagcat aatgctgtggaactgagaagccttttgcagtaccttgttaatcaactaaagaagggtgtg ggcatagaacttgttgtcctggaggagctcattcagcaaatggcgaatgtgcaatacact gagaacatgacggaggaacaagttgatgctatggcaggaagtgagactttgcggcagcaa gcttcactatttggagcgacaaggaactataaggtattgagtaagtctacaaacaggttg agggattcattgcttccaaaagaagagcccaaacttgcagttcctttgttactgcttatt gctcagcaccgatccaagatcataataaatgcagatgctacatatattaaaatggtcagt gagcagtttgatagatgccatggaatacttcttcagtatgttgagtttctttcaagtgct gtaactccaatcgcctatgctcaactaataccacctttgcaagatctggttcacaaatac cacattgagccagaggttgctttccttatataccgcccggtgatgcggctttttaagagc actagtggaggtgacacctgttggcctcttgatgataacgaggaaggagaatctgtatca tctgatgatcttatcttgcatcctgacttgtctcaggaaccgatcatgtggtcagatctt attaacacagtcaggtcaattctgccagcaaaagcttggaacagtctttcaccagattta tatgctactttctggggcttaacgctctatgatcttcacttcccaaaagaccgttacgat acagaaatcaagaagctgcatgacaatctcaaacaattggaggacagctcagataactct agcattgcaatttcaagacgtaagaaggacaaggagagaatccaagatttacttgacaaa ctgaatagtgaatctcagaagcaccaacagcacattgcatctgtggtccaaaggctagcc cgtgaaaaggataagtggttgagttccagtccagatgcactgaagatcaacatggagttc ctacagcgctgcatattcccacgctgtgtttttagtacgcaggatgccgtatattgtgct acgtttgtccaaacactacactcacttgggactccattctttaacacagtcaatcatatt gatgtcctcgtctgtaagacccttcagccaatgatatgctgttgcacagaatttgaagct ggcaggcttggaaggttttttcacgatacattaaagatggcctactattggaagagcgat gaatctgtgtatgagcgtgaatgtgtaaacaaaccaggttttgctgtatacttcagatac cctaacagccagcgtgtatcttatagtcagtttgttcgggttcattggaagtggagttca agaatcaccaaggtgcttaaccaatgcatggaatcaaaagaatacatggaaatccggaat gccctaattgtgcttacaaagatttccagtgtctttcctgtaattcgtaaaagtggggtc aatcttgagaaacgggtggctaaacttaaaggggatgaaagagaagatcttaaagttctt gctactggtgtagctgctgctttggctgctcgcaagagttcttggctatctgaagaagag tttggcatgggccacattgatctgaagccagcaacagcaagatctgcacatggaaaccag tccacagatccctcgatggcaaaagatcaaaatgcccgtgcaaagtctatagagagtagg catgaaaagtcagaagctgctatgaagcctgatgttcaacaaaagaagagctctgtgtct gcaaatggatctgataatcaaataccatcttcctccatacaaggaaaatcttcagggact gtacgtgtggctgatgaacctccaaaacctgtatctgatgagggggttaaggtttctgcg aggcctacttcagaatctgagacaagggtgccacaaaagcgtgctgcacacagcactggg aagatattgaagcatgatgtggcaaaggaagatgcaaaaactggaaaatcttccagccgg aatgtaaatcaacaagcttcaaccgctcctgttgacagagaacctttgtctcaggcagcc gattttgtccaagataccaattccactagtagcaatggtaacttgcatccagcgccgcga aaggtttcatcctcctcccaaagaaatgcagcgttaaatggagcagctaatccctctggt gaggctaatgagctgactgactctactttgagacagcaaaaaagacttgctccagctgag gaacaggataggtcaagtaagcgaaggaaaggagaaactgaaccccgagacagtgatttg agtgaacaccatgtagacaaggaaaagagtttggactcacgtgccgttgataagtttcgt tcagtagatcatgagaagagtactaatgaggaacaaaacttaagtagggcagaaaaaata agagagaaatttgatgataaatatgacagagatccaagagaaaaattagatcgagctgaa aggcgccgtggggaagatgccattgacagatcaacagatagattatcagataggagagaa cgttctattgaaaggatgcaagatagagttacagataaagctcctgaaaaaggaagagag gatagaaataaggatgagaggaataaaggtaaatatgctgaaccttcagttgaccggaca cattctactgatgaaaggttccgagggcaaagtttgccaccacctccaccacttcccaca agttttgtaccccaatcagttggtgccaaccgaagagaagaagatgctgaccgaaggggt gggagcgccaggcatatacaaaggtcatctcccaggcgcgatgagaaagaaaggaggcag tcagaggagaatgcttcgtcatttcaggatgatggaaagcacagaagggaagaggatctt cgtgatagaaagcgtgaagatagggatgttccgtcaaacaaggtagatgacagagatagg gaaaaagggactactacgaaggaagacagcgaccctagtagcgcttccaaacgaagaaag gttaagcgagaacagccttctttagaagctggggaatacgcaccttctgctccacagctt ccttcccatggaactggcagctcacaattgtctgatgtacgagaacgagaaagaaaaggt gtaatttcacagcatcgtagttcgcacactgatgaccttcctaggacgcatggcaaggat acgacaagcaagccaagtcgtcgagaggctgaacaaatgcatgatagggaatgggaagag gaaaagcggccaagaactgaaacaaaaaggaagcatcggaaatag

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