Setaria italica (foxtail millet): 101755144
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Entry
101755144 CDS
T02818
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 50
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sita03041
]
101755144
03009 Ribosome biogenesis [BR:
sita03009
]
101755144
Enzymes [BR:
sita01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101755144
Spliceosome [BR:
sita03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
101755144
Ribosome biogenesis [BR:
sita03009
]
Eukaryotic type
90S particles
Helicases
101755144
Pre-60S particles
101755144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-GeneID:
101755144
NCBI-ProteinID:
XP_004986040
UniProt:
K4A6T7
LinkDB
All DBs
Position
IX:complement(58386794..58390175)
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AA seq
654 aa
AA seq
DB search
MEVAGAQARAVPLMLRHPASLRTSVSVSCAGSRRSWAAAATAEGDETRGYDKVPMDTPGA
YRLVDRATGRSVIVWGGTDDGDEVAMPSPAVLSRTTDRPSRGSGGGTGIGNFGRLKAQKI
KSLVTRSAQLKREGSNRSSTNRFDESSFDDSDEEESYFERRKPVSDSARHAKQNSNSRNE
RTRGGHSLNSVLSQYKGDDLDSPGSEATSGPKGWGSITDVTYGRQTRKQREPLDFPKRKG
PLDSGFFSRRSFKEIGCSDEILGALRNFDFPRPSHIQALAYGPILEGRSCVIADQSGSGK
TLAYLCPIVQNLRNEEVQGLHKSSPRNPRVIVLTPTAELASQVLNNCRLISKSGVPFRSM
VATGGFRQKTQLESLEQELDVLIATPGRFLYLLQEGFVQLSSLRCVVLDEVDILFGEEGF
EQVLHQLITVAPVTTQYLFVTATLPLDIYNKVVETFPDCEVIMGPGVHRTSSRLEEILVD
CSGDDNEEKNPETAFSNKKSALVKILEESPVRKTIIFCNKIETCRKVENVLRRLDRKASQ
IKVLPFHAALDQAQRIANIKEFLNKQTADSMFLVCTDRASRGIDFANVNHVVLFDYPRDP
SEYVRRVGRTARGASGNGKAFVFAVGKQVSLARRVMERNMKGHPLHDVPTEITF
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggcgggggctcaggcccgcgcggttcccctgatgctccgccaccctgcctcc
ctgcggacttccgtctccgtttcctgcgccggctcccgccggagctgggcggcggcggcc
acggcggagggggacgagacccgcggctacgacaaggtgccaatggacaccccaggagcg
taccgcctggtggaccgggccaccggccgcagcgtcatcgtgtggggcggcaccgacgac
ggcgacgaggtcgccatgccgtccccagcggtgctctccaggaccaccgaccgccccagc
agaggtagtgggggaggtacaggtatagggaattttggcaggttgaaggcgcagaaaata
aaatccttggttacaagatcagctcagctcaagagagagggttctaatcgctcaagcacc
aaccgatttgatgaatcttctttcgatgattccgatgaagaggaaagctactttgaaaga
agaaagcctgtctcagactcagcacgccatgcaaaacagaacagtaactccagaaatgaa
aggactcgaggtggacattctttgaattctgttttgagccaatacaaaggtgatgatttg
gactccccaggttcagaagctacttctggtcccaaaggatggggtagcattactgatgtt
acttatggacgacagactcgaaagcaaagggagcctctagacttccctaaaagaaaaggt
cctttggacagtggatttttcagtcgcagatcctttaaggagattggctgcagcgatgaa
attctaggtgcattgagaaattttgatttccctcgtccatcacatatccaggctctggcg
tatggtcctatcttggaggggaggagttgcgttattgctgatcaaagtgggtctggcaag
acactggcatatctttgccctatagtacaaaatttaaggaacgaagaggttcaggggctc
cataaatcatctcctaggaatcccagggtgatagtgttgacacctactgctgaacttgct
tctcaggtcctcaacaattgccggttgatatcaaaatctggggttccatttaggtctatg
gtggcaaccggaggatttcgacagaagacacagttagaaagccttgagcaagagcttgat
gtacttatagcaacacctggccgtttcttgtatctgcttcaggaaggctttgtgcagttg
tctagccttagatgtgttgtgttggatgaagtggacattttatttggtgaagaaggtttt
gagcaagtgcttcatcaattgattactgttgcaccagtgacaacacaatatcttttcgtg
actgcgacacttcctcttgacatctataacaaggttgttgaaacatttcctgactgtgag
gttatcatgggacctggtgtgcaccgaacaagctctcgccttgaagagatccttgtggac
tgcagtggagatgacaatgaagaaaagaatccagaaacagccttttcgaacaagaaatcg
gcgcttgtaaagatactcgaggaatctcctgttcgcaaaacaattattttctgcaacaag
atcgagacatgcagaaaggttgagaatgtgttgaggcggcttgacaggaaagcctcgcaa
atcaaagttctccccttccatgccgcgttggatcaggcccagcgcatcgcgaacatcaaa
gagttcctgaacaaacaaacggcggactccatgttccttgtgtgcacggatagggcgtcg
cgaggcatcgactttgcgaacgtgaaccacgtggtgctcttcgactacccccgcgatcca
agtgagtacgtgcgccgtgttgggcggacggcccgcggcgcgtccggcaacggcaaggcg
ttcgtgttcgcggtgggcaagcaggtgtccctggccaggagggtgatggagaggaacatg
aaggggcacccgctgcacgacgtgccaacagaaattactttctga
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