Setaria italica (foxtail millet): 101755532
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Entry
101755532 CDS
T02818
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sita03041
]
101755532
Spliceosome [BR:
sita03041
]
Common components
Common spliceosomal components
General mRNP proteins
101755532
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Ortholog
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GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_MUD2_C
DUF8489
RRM_occluded
RRM_7
RRM_ACIN1
RRM_8
DUF3280
Motif
Other DBs
NCBI-GeneID:
101755532
NCBI-ProteinID:
XP_004983027
UniProt:
K4A845
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All DBs
Position
IX:complement(18851781..18858225)
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AA seq
542 aa
AA seq
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MEFDEYEYLEKAVEPAAPPANGSGSGEKDRGSRRREGGEDRASKRSRSGEDRDSDRDRHR
SGREHRDRDRDRDDGKDKEKSRDSRGKDRDREGRDREKERGDRHRPRDKEVERERRSRSR
SERRRAEEEEMVRELERERERSERGHYRDRDVRRRKDDGAEPEVDPERDQRTVFAFQLSL
KADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALSGQPLLGQA
VMVKPSEAEKNLVQSNATSGGAASGGARKLYVGNLHSNITEDQLRQVFEPFGQVELVQLP
VDPMTGLCKGYGFIQFARLEDAKAAQSLNGQLDIAGRVIKVSAVTDHVGVQVGGATTGDL
DDDEGGGLALNASSRAALMLKLDRSGTATSLTGGIGTAGVAIPGPASSVLGAPAATSLLP
PTIPAVGSVPGAPMLPVTSQSTIMSAPTEFLLLKNMFDPTVETDPDFDLDIRDDVQDECS
KFGAVKHIFVDKNTAGFVYLHFDSVTAAAKAQQALHGRWFAGKMITATFMTAQEYSAKFP
NL
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggagttcgacgagtacgagtacctggagaaggcggtggagcccgccgctccgccggcc
aacggctccggctccggcgagaaggaccgcggctcgcgccgccgcgagggcggcgaggac
cgcgcgtcgaagcgctcccgctccggggaggaccgcgacagcgaccgcgaccggcaccgc
agcggccgcgagcaccgcgaccgggaccgggaccgggatgacggcaaggataaggagaag
agccgcgacagccgcgggaaggacagggacagggaggggagggaccgggagaaggagagg
ggtgacaggcaccggcccagagataaggaggtggaacgggagcggaggagtcggagccgt
tcggagcggcgccgcgccgaggaggaggagatggtgagggagctggagcgggagcgcgag
cgcagcgagcgtggccattaccgtgaccgtgatgtcagacggaggaaagatgatggtgct
gagccagaagttgatccagaaagggaccagaggactgtatttgccttccagctatcactg
aaggcagacgaaagagatgtttatgagttcttctcaagggctggaaaggttcgtgatgtt
cgccttattatggaccgaaactcacgacgttctaaaggagttgggtacattgagttttat
gacgtgatgtctgttcccatggcaattgctctgtctggtcaaccgcttcttgggcaagca
gtgatggttaagccatctgaggctgaaaagaacctagttcagtccaatgcgacatctggt
ggtgcggcttcaggtggagcaagaaagttgtatgttggcaatcttcactctaatataact
gaagaccaattgagacaggtattcgaaccatttggacaagtggagcttgttcagctgcct
gtagatccaatgactggactttgcaaaggttatggtttcattcagtttgcacggcttgaa
gatgcaaaagctgcgcagagcttgaatgggcagcttgatatcgctggcagagttattaag
gtttcagctgttactgatcatgtgggagtacaagttggtggagcaactactggagattta
gatgatgatgaaggtggaggcttggcattaaatgcaagctccagagctgctcttatgctc
aaattggacaggagtggcactgcaacaagcttaactggtggtattggcactgctggggtg
gctataccaggaccagcttcatcagttcttggggccccagcagctacttctcttttacca
ccaactattcctgctgttggatcagttcctggtgcacctatgcttcctgtcaccagtcaa
tctacgatcatgtcagcacctacagaattcttattgcttaagaacatgtttgaccccaca
gtggagacagatcctgattttgatttggatatcagagatgatgtccaagatgaatgttcc
aagtttggtgcagtgaagcacatttttgttgacaaaaatactgcaggttttgtgtatctg
cactttgatagtgtgactgcagcagcgaaggcccaacaagcacttcatggaagatggttt
gccggcaaaatgattacagcaacatttatgaccgcgcaggagtacagtgcgaagttccca
aacttgtga
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