Setaria italica (foxtail millet): 101756138
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Entry
101756138 CDS
T02818
Name
(RefSeq) histone deacetylase 15 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sita01009
]
101756138
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sita03019
]
101756138
04131 Membrane trafficking [BR:
sita04131
]
101756138
03036 Chromosome and associated proteins [BR:
sita03036
]
101756138
Enzymes [BR:
sita01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
101756138
Protein phosphatases and associated proteins [BR:
sita01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101756138
Messenger RNA biogenesis [BR:
sita03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
101756138
Membrane trafficking [BR:
sita04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
101756138
Chromosome and associated proteins [BR:
sita03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
101756138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
101756138
NCBI-ProteinID:
XP_004955535
UniProt:
A0A368PX87
LinkDB
All DBs
Position
II:complement(3436337..3445506)
Genome browser
AA seq
631 aa
AA seq
DB search
MASDMKPLSDQKDEIPSRSVENCGVSKQACHGKSQSCDSDVKPFCAEVIGISSLIGSHTD
GKASKENCGACSFTYDHADAIVEDVKVAVARSGHAESADHDGCQTAKNRSCMAVDDLPQE
FEREQAGATLEELFFSNDEEEDDSDWDPSSSLVVNRWFCLNCTMPNVDEITNCLNCHELK
GSVVGGYDAFKTQIAQAALVSPDTELPPVSTAIGFDERMLLHSEQLEIKPNPHPERPDRL
RAIAASLAAAGIFPSKCALVPPREITKEELLMVHTPDHIESVEQTKNMLYSYFTSDTYAN
GHSACAAKLAAGLCADLASLIVSGRVHNGFAMVRPPGHHAGVKQAMGFCLHNNAAVAALA
AKRAGAKKVLIVDWDVHHGNGTQEIFDGDSSVLYISLHRHEYGNFYPGTGAADEVGILDG
QGFSVNIPWSRGGVGDNDYIFAFQTVVLPIAAEFAPDITIISAGFDAARGDPLGCCDVTP
MGYSIMTSLLSDCSKGRLLVILEGGYNLRSISSSATEVVKVLVGESSGFHFETAPSKEGL
KTVLQVLKIQQQFWPVLGPTYASLQEQQGSVFSKSTNKTNELRKRKHSGGSGPFWWKFGS
KRLLYRVLYEGRYLRKIKVSGEGKTIDSAEP
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgatatgaaaccgcttagcgaccaaaaggatgagataccctcccgttccgtg
gagaactgtggagtttccaaacaagcttgtcatggcaaatcccaaagctgtgacagcgat
gtaaaaccattttgtgctgaagtcattggaatttcctcattgattgggagtcatactgat
gggaaggcttcaaaagagaactgtggggcatgcagtttcacttatgatcatgctgatgcg
atagtagaagatgtcaaggttgccgtggcaaggtcaggtcatgctgagagtgctgatcat
gatggctgtcagactgccaaaaatagaagttgcatggctgttgatgatctgccgcaggag
tttgagagagagcaagctggggctacacttgaggagctgtttttctctaatgatgaagag
gaagatgacagtgactgggacccttccagtagccttgttgtgaataggtggttttgcttg
aactgcacaatgccaaatgtggacgagattactaattgcctgaattgccatgagcttaag
ggatcagttgtaggtggatacgatgcttttaaaactcagattgcacaggctgctttggta
tctcctgacacagaattaccaccggtgtctacagcgattggttttgatgaaagaatgctg
ctccacagtgagcagctagaaatcaaaccaaatccacatccagaaagaccggaccgcctt
cgcgcaattgctgccagtcttgctgctgcaggaatctttccctcaaaatgtgctttggta
ccccctcgggaaattaccaaggaggaactcctaatggttcatactccagaccacattgaa
agtgttgagcagacaaaaaacatgctttacagttacttcacttcggatacttatgcgaat
ggacactcagcatgtgccgccaaacttgcagcaggactatgtgctgatcttgctagtttg
atagtatctgggcgtgttcacaatggctttgcaatggtgagacctcctgggcatcatgca
ggggtgaagcaagcaatgggtttttgtcttcacaacaatgcagcagtggctgcattagct
gcaaaaagagcaggtgcaaagaaagtcctcatagttgactgggatgtgcaccatggaaat
ggcacacaagagatattcgacggggacagctctgtattgtacatatcactacatcgtcat
gagtatggaaacttctatcctggaactggagcagcagatgaggttggaattctcgatggt
caaggtttctcggttaatataccttggagccgtggtggtgttggagacaacgactacatc
tttgcttttcagaccgtggtgcttccaatagctgcagaatttgccccagacatcacaata
atatctgcaggattcgatgcagctagaggtgaccctcttggttgttgtgatgttactccg
atgggatactctataatgacatccttgttatctgattgctcaaagggaagattgttggtg
atacttgagggaggatacaatcttcggtcgatatcttcatcagctactgaagttgttaag
gttttagttggcgaaagttcaggttttcattttgaaactgcaccatcaaaagagggcttg
aagactgttttacaagtcctgaagattcagcaacaattttggccagttttaggtccaacc
tatgcatcactgcaggaacagcaggggtcggttttttccaaatctactaacaaaactaat
gagctgaggaaaaggaagcattcaggaggatcagggcccttctggtggaagtttggaagc
aaaaggcttctgtacagagtgctatatgagggccgctatctgaggaagatcaaggtctct
ggagaaggaaaaactattgattcagcagagccttag
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