Setaria italica (foxtail millet): 101756259
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Entry
101756259 CDS
T02818
Name
(RefSeq) LOW QUALITY PROTEIN: protein argonaute 4B
KO
K11593
eukaryotic translation initiation factor 2C
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sita03019
]
101756259
03036 Chromosome and associated proteins [BR:
sita03036
]
101756259
Messenger RNA biogenesis [BR:
sita03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
101756259
Chromosome and associated proteins [BR:
sita03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
101756259
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
101756259
microRNA pathway
RISC loading complex
101756259
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
101756259
NCBI-ProteinID:
XP_014660666
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Position
V:complement(3550533..3557388)
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AA seq
719 aa
AA seq
DB search
MCDFGDFVTATYLTDEAVALQASSAAEDHSRAGPGMSRSEALVKRWPPPGNISFLSSQRT
ETAGQRRVCSLHRLLPPRHSPRHSRRINRATFALASPGLAKRALKSLRIKTTHTNSEFKI
VGLSEKSCFEQTFPLKQRNGSNSDTVEVTVYDYYMKGGGIKLRYSVNFPCLNVGKTKRLT
YIPIELCSLVSLQRYTKALTVPQRSSLVQNSWRNPSERKSDLYAALKQSDYNSDSMLKKC
GISITPEFTQVDGRVLNPPKLKAGNDEXVFVRDGKWNFNNNRFVRASRVNQWVAVNFSSR
CNVRDLVRRLIQCRNAKGMVYAVIEENPGMRRAPAPNRVDDMFDQIKRRFPNDWPAFLLC
ILPERKNCDIFGAWKRVCLADYGIVTQCLGPPPSNINDQYLTNLLLKINAKLGGLNSMLQ
MEKKPAIPLMSRVPIPTMILGMDVSHGSPGRDLPSVAAVVSSLGWPLISRYRASVCTQSP
RLEMIDSLFKPEGDDDRGLIRQGLIEGFGNSCRKLPQQIIIFRDGVSEGQFTQVLNIELQ
QIIEACKFLQCKXSPKFTVVVAQKNHHTRFFRDGNDVANVPAGTVVDKGICHHRNSDFYM
CAHAGRIGTTRPTHYHVLYGEIGFTPDDLQELVHSLSYVYQRSTSAISIVAPVYYAHLAA
SQVRQFVRFDDSSETGSSASGGPAPVPELPRLHEIVIRVFVAESLCVWAYELCILVGSV
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgattttggtgactttgttactgctacctaccttactgatgaagctgttgcactc
caagcgtcgtccgccgcagaggaccattcgcgggccgggccgggaatgagtcgaagcgaa
gctctcgtgaagcggtggccgcccccggggaacatttcattcctgagctcgcagcgcaca
gagacagcgggccagcggcgagtgtgctcgcttcaccgcttgctcccacctcgccattcc
ccgcggcattcgcggcggataaaccgcgccacgttcgcgctcgcatcgccgggcctggca
aagcgtgcattgaagagtttgaggatcaaaaccactcacacgaactctgaattcaaaatt
gttggcttgagtgagaagtcttgttttgaacagacgttccctctgaagcaaagaaatggc
agcaactctgataccgtggaagtaactgtctatgattactacatgaaaggtgggggtata
aaactgagatattctgttaatttcccctgcttgaatgtggggaagacaaagcgtctgaca
tatataccaatagagctatgcagtctggtgtctctgcaaaggtacacaaaggctctgaca
gtgccacaacggtcctcgctcgtccagaattcctggcgcaaccctagcgagaggaagtca
gacttgtatgccgctctaaaacaaagtgactataattccgatagcatgctaaagaagtgc
ggcatctcaataactccagagtttactcaagttgatggtagagtccttaacccaccaaag
ttaaaagctgggaatgacgagnatgtttttgtgcgtgatgggaagtggaacttcaataac
aacaggttcgttcgggctagcagggtaaaccaatgggtagctgttaatttttcttcacgc
tgtaatgttcgggatcttgttcgacgcctcatccaatgcagaaatgctaagggaatggtg
tatgcggtgattgaggagaaccctggaatgagacgggctcctgcaccaaacagggtggat
gacatgtttgaccagataaaaagaagattccccaacgattggccagcatttctactgtgt
attcttcctgagaggaagaattgcgatatttttggggcatggaagcgggtatgcctcgcg
gactatggcattgtcacgcaatgcttgggtcctcctccttcaaacattaatgatcagtat
ctcaccaacttgctgctgaaaataaatgcaaagcttggtgggttgaattcaatgctgcaa
atggaaaagaaacctgccattccactcatgtcacgggttccaattccaaccatgatcctc
ggcatggatgtttcccacggttcaccaggacgtgatttaccatctgttgctgcggttgta
agttccttggggtggcctctcatatcaagatacagagcttctgtctgcacccagtcaccc
aggctagagatgattgattccttgttcaagccggagggagatgatgatcgtggcctcatt
aggcaaggtctaatagaaggctttggcaacagttgcagaaaactgccgcaacaaattatc
attttcagggatggagtcagtgagggccagtttactcaggtgctgaacattgagctacag
caaattattgaggcatgcaagtttctccaatgcaaatagtcccccaagttcacggtggtt
gttgcacagaagaaccaccacacaaggtttttcagagatggcaatgatgtggctaatgtc
cctgccggcactgttgtggataagggaatctgccaccacaggaactccgatttctacatg
tgtgctcatgccggcaggattggtacaacaaggccaacacattaccacgtgctgtatggc
gagatcggcttcactcctgatgacctgcaggagctcgtgcactccctctcttatgtgtac
cagaggagcacctcagccatatccatcgttgcaccggtgtactatgcgcacctggcagcg
tctcaggtgcggcagttcgtcaggttcgacgactcgtcggagacagggtcatcggccagt
ggtggccccgcgccagtgccagagctgcctcggctgcatgagatagtcatacgggtgttt
gttgctgagagcctctgcgtctgggcgtacgagctatgcattttggtgggctcagtatga
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