KEGG   Setaria italica (foxtail millet): 101756843
Entry
101756843         CDS       T02818                                 
Name
(RefSeq) aladin
  KO
K14320  aladin
Organism
sita  Setaria italica (foxtail millet)
Pathway
sita03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:sita00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    101756843
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sita03019]
    101756843
Messenger RNA biogenesis [BR:sita03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     101756843
SSDB
Motif
Pfam: ANAPC4_WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EML_2 WD40 eIF2A WD40_Prp19 WD40_MABP1-WDR62_1st DUF7165
Other DBs
NCBI-GeneID: 101756843
NCBI-ProteinID: XP_012703844
LinkDB
Position
VIII:244756..252639
AA seq 437 aa
MPSFPPPGAVTVCEINRDLVAADALSDDRAKEAYGDVLGMVFSPIPFQPDALPHIREAPA
AEQTESNENVPAASATSSISEFFKRMIFPPQGPNLLQEFDTQKISWNPHKHCLAFVSGKN
QVTVHDFEDSDAKEPCILTSDHVKAIEWRPNSGKMIAVACKGGICLWSASYPGNAPFMKA
GVTSSSLSAFRSGDQWILVDVLRDSSAEQVSALCWKPDGRYLASASCNSPSFTIWDVSQG
LGTPIRRGLSNISLLRWSPSGDYLLAAKFDGTFHFWETNTWTSEPWSSSNGYVSGANWDP
EGRVALLSFSNSTTLGSIHFSSKPPSLDAHLLPVELPEISSLIVSRGIEKLAWDASGERL
ALSFKDGNEMYRGLLAVYDVRRSPLVSLSLVGFIRGPGEGAKPLAFAFHSKFKQGPLLSV
CWSSGWCCTYPLILHSH
NT seq 1314 nt   +upstreamnt  +downstreamnt
atgccgagcttccctcctcccggcgccgtcactgtctgcgagatcaaccgcgacctagtt
gcggcagatgccttgtccgacgaccgcgccaaggaagcatacggggatgtccttggaatg
gtcttcagccccatccctttccagccagacgctcttccccacatccgcgaggcccctgct
gctgagcaaactgagtccaatgagaatgtacccgcagctagtgcgacttcctccatatca
gagttcttcaaacggatgatcttccctccacaaggaccaaatctgctacaagaatttgac
acccagaaaataagttggaatccgcacaagcattgtctagcatttgtgtctgggaagaac
caggttacagtacatgactttgaggattcagatgctaaagagccgtgcattttgacaagt
gaccatgttaaggcaattgagtggagaccaaatagtggcaagatgattgcagttgcctgc
aagggagggatatgcctctggtcagcatcgtatcctggcaatgctccattcatgaaagct
ggggtcacctcttcttcccttagtgcctttcgttctggtgatcagtggatactggtggat
gttcttcgtgattcttctgctgagcaagttagtgcactttgttggaagcctgatggaaga
tacttggcatctgcctcctgcaatagtccatcttttacaatttgggatgtttctcaaggg
ttgggtactcctatacggcgtggattaagtaatatatcactactgcggtggtcacctagt
ggagattaccttctagctgctaaattcgatggaacttttcacttctgggagacaaacaca
tggacttcagaaccttggtcttcatctaatggatatgtgtctggagcgaattgggatcca
gaaggtcgtgttgcattgttatccttttctaactcaacaacacttggctcaattcacttt
tcatctaagccaccatctttagatgcccatctcctaccggttgaacttccagaaatttcc
tccctgattgtaagccgaggcatagagaaattagcatgggatgcttcaggggagcgtctg
gcattgtcgttcaaagatggaaatgaaatgtaccgtggccttcttgctgtatatgacgtg
aggagatctccacttgtctcactatcactagtcggattcattagaggacctggagaagga
gcaaaaccacttgcttttgcttttcatagcaaatttaagcaaggacccttgctttctgtg
tgctggagcagcggctggtgctgtacatatccactgatacttcattcccattaa

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