KEGG   Setaria italica (foxtail millet): 101757002
Entry
101757002         CDS       T02818                                 
Name
(RefSeq) splicing factor U2af large subunit A
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
sita  Setaria italica (foxtail millet)
Pathway
sita03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sita00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101757002
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sita03041]
    101757002
Spliceosome [BR:sita03041]
 Complex A
  U2 snRNP components
   U2 related factors
    101757002
 Complex B
    101757002
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_occluded DUF4154
Other DBs
NCBI-GeneID: 101757002
NCBI-ProteinID: XP_004979793
UniProt: K3ZHU2
LinkDB
Position
VIII:complement(35296328..35301813)
AA seq 593 aa
MAEYDERYEGNGGPVSGADAAGAYAQAEYGAAPPAAGGSPPAGAKPTGFSDHADGRNSQP
QHETQSHDSGSSKSRERDRDRDKGKDRERDRDRGRDRERDRDRDKDRERGDRDRDRDRHH
RDRRERSEKREHRDRSHDRDRHRDDRDRHRSLDSERRRDRDRDGHRRHRSRSRSPSKSRD
RDRRSRSRSRSRSKSKRVSGFDQGPLQQTMPIVTAGAVPGQLPVVTPIPGMFPNLLMGPM
NPLIQPQAMTQQATRHARRVYVGGLPPTANEQTVAIFFNGVMAAIGGNTAGPGDAVLNVY
INHDKKFAFVEMRSVEEASNAMALDGIMFEGAPVKVRRPTDYNPSLAAALGPSQPNPNLN
LAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQVRELLESFGPLRGFDLVKDRETGNSKG
YAFCVYQDLTVTDIACAALNGIKMGDKTLTVRRANQGAAQPRPEQESILLQAQQQVQMQK
LVYQVGGALPTKVVCLTQVVTADELRDDEEYEDIVEDMREEGRKYGNLVKVVIPRPDPSG
APAAGVGKVFLEYADVDGSTKAKTGMHGRKFGGNQVVAVFYPEGKFAAEQYDG
NT seq 1782 nt   +upstreamnt  +downstreamnt
atggccgagtacgacgagcgctacgagggcaacggcggccccgtctccggggcggacgcg
gctggtgcctacgcccaggccgagtacggcgccgctcccccggccgcggggggctcgccg
cccgccggagccaagcccaccgggttctccgaccacgccgacggccgcaactcccagccc
cagcacgagacacagtcacatgacagtggttcctcaaaatcccgagaaagggacagagac
cgtgataagggcaaggacagggagcgcgacagggaccgtggccgagatagggagagggac
cgcgacagggataaggaccgtgaaagaggtgacagggaccgagatcgtgatcgccaccac
agggatcgccgcgagcgcagcgagaaaagggaacaccgcgatcgttctcatgatcgtgac
cgccaccgtgatgatcgtgaccgtcacaggagccttgattctgaaaggagaagagatcgt
gacagagatggccaccgtaggcatcgatcccgctcccgctctccgtccaagagtcgtgac
cgtgaccgtagatctagatctcgttcacgctctcgttcaaagagcaagcgtgtgagtgga
tttgatcaaggaccgctgcaacagacgatgcctatagttactgctggtgctgttcctggt
cagctgcctgtagtcactcctataccagggatgtttccaaacttattaatgggaccgatg
aacccccttattcaacctcaagccatgacacaacaggctactcgacatgctcggcgtgtg
tatgttggtggacttcctccaactgctaatgagcagactgttgccatattcttcaatgga
gttatggcagctattggaggaaacactgctggtccaggtgatgctgttcttaatgtctac
ataaaccatgacaagaaatttgcttttgttgagatgagatctgtggaggaagcaagcaat
gcaatggccttagatggcataatgttcgagggagcaccagtgaaggtcagaaggccgacg
gactataatccttccttagcagctgcgcttggcccaagccaaccaaatcccaatcttaat
cttgctgctgttggcttaacgcctggctctgctggaggattagaaggtcctgatcgcatt
tttgtgggtggtctcccctattacttcactgaggcccaagtgcgggagttgcttgagtcc
tttggtcctctgcggggatttgatcttgtgaaggatagggaaactggtaactcgaagggc
tatgctttctgtgtgtaccaggatcttactgttaccgacattgcctgtgctgctcttaac
ggtatcaagatgggagacaagacccttactgttaggcgggcgaaccaaggagctgctcag
cctagaccagagcaggaaagtatcctgttgcaggcacaacaacaggtgcaaatgcagaaa
ctcgtgtaccaagttggaggtgcccttccaacaaaagtcgtatgtctgacacaggtagtc
acagcagatgaactgagagatgatgaggaatatgaggacattgtggaggacatgagggaa
gaaggacgcaaatatggtaacttggtgaaagttgtaatcccacggcctgaccccagcggg
gctcctgctgctggagttgggaaggtgtttttggaatatgcagatgtggacggatcgacc
aaggcgaagacgggcatgcacgggaggaagtttggcgggaaccaggtggtggccgtgttc
taccccgagggcaagtttgctgcggagcagtatgacggatga

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