Setaria italica (foxtail millet): 101757084
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Entry
101757084 CDS
T02818
Name
(RefSeq) homeobox-leucine zipper protein ROC1
KO
K09338
homeobox-leucine zipper protein
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sita03000
]
101757084
Transcription factors [BR:
sita03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
101757084
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
TUSC1
MRP-L20
DivIC
DciA_cyano_C
Motif
Other DBs
NCBI-GeneID:
101757084
NCBI-ProteinID:
XP_004972697
UniProt:
K3YGB7
LinkDB
All DBs
Position
VI:complement(3018228..3023875)
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AA seq
785 aa
AA seq
DB search
MTPARRMPAMIGRNGVAYGSSSALSLNQTDLLDSHHLQQAFQQQLFDQIPAGAVDSGDNI
IHGRSDTLADEFESKSCSENPDGTSGDDGQEDPNQRPNKKKRYHRHTQHQIQEMEAFFKE
CPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERQENAQLRADNDKLRAENLRY
KEALSTASCPSCGGPAALGEMSFDEHHLRLENARLRDEIDRISGIAAKHVGKPMVSFPVL
SSPLAAAAARSPLDVVGAFGVQPSGLGADHLFGVGASTGELLRSVSTGQLDADKPMIVEL
AVAAMDELLRMARLDAPLWGASAAGAQLDEEEYGRMFPGGLGLRQYGLRPEASRDGAVVI
MTRDSLVEILMDANRFAAVFSSIVSRASTHEVLSTGVAGSYNGALQVMSMEFQVPSPLVP
TRESYFARYCKNNADGTWAVVDVSLDSLRPSPVLKCRRRPSGCLIQEMPNGYSKVTWVEH
VEVDDRSVHILYRPLVNSGLAFGAKRWVGTLDRQCERLASAMASNIPNGDLGVITSIEGR
KSMLKLAERMVASFCGGVTASAAHQWTTLSGSGAEDVRVMTRKSVDDPGRPPGIVLNAAT
SFWLPVPPKRVFDFLRDETSRSEWDILSNGGAVQEMAHIANGRDHGNCVSLLRVNSANSN
QSNMLILQESCTDASGSYVVYAPVDVVAMNVVLNGGDPDYVALLPSGFAILPDGPPGAAP
HGESGSLEAGGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIACTVDRIKAAVCAEGNP
QQPSI
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgacgccggcgaggcgcatgccggcgatgatcggccggaatggagtcgcgtatgggtcc
tcgtcggcgctgtctctgaaccagactgacctgctagacagccatcacctgcagcaagcg
ttccagcagcaactctttgatcagatcccagctggtgcagtggacagcggcgacaacatc
atccatggccgctccgacacactggcagatgagtttgagagcaagtcgtgcagcgagaac
cccgatggcacctctggcgatgacggccaggaagaccccaaccagcggccgaacaagaag
aagcggtatcaccgccacacccaacaccagatccaagaaatggaagcgttctttaaggag
tgcccgcacccagatgacaagcagcggaaggagctgagccgggagcttggcctcgagcca
ctgcaggtcaagttttggttccagaacaagcgcacacagatgaagaaccagcacgagcgg
caggagaacgcgcagctgcgcgcagataacgacaagctacgcgctgagaacttgaggtac
aaggaggcgctcagcacggcctcgtgccccagctgtggcggtcctgctgccctcggcgag
atgtccttcgacgagcaccatctccggctcgagaacgcccgcctccgcgacgagatcgac
cggatctcgggaatcgctgccaagcacgtcggcaagcccatggtctccttccccgtgctc
tccagcccgctcgctgccgccgcggcccgctccccgctggacgttgttggcgcgttcggc
gttcagccgtctggcctcggcgccgaccacctgttcggcgttggagccagcacgggagag
ctgctgaggagcgtgtcgaccggccagctggatgccgacaagcccatgattgtggagctg
gccgtcgccgcaatggatgagctcctacggatggcacggctggacgcgccactgtggggc
gcgagcgcggcaggggcacagctcgacgaggaggagtatggccggatgttcccaggcggg
ctcgggctgaggcagtacggtctacggccggaggcatcgcgggacggcgccgtcgtgatc
atgactcgtgacagcctcgtcgagatactcatggacgcgaaccgattcgctgcagtgttc
tcgagcattgtgtcgagggcttcgacgcacgaggtgctgtcgactggcgtggcagggagc
tataatggtgcattgcaagtgatgtcaatggagtttcaggtgccgtcaccactggtgcca
acacgggagagctacttcgcgaggtactgcaagaacaatgccgatgggacgtgggctgtc
gtggatgtctcgcttgacagcctccgccctagccctgtcttgaagtgccggcgcaggccg
tctggctgcctgatccaagaaatgcctaatggctactcaaaggtgacctgggtggagcat
gttgaggtggatgacaggtcagtgcacattctctacaggcctttggtgaattcagggctt
gcattcggtgcgaaacggtgggtcggcacccttgaccgacaatgtgagcgtctcgccagt
gccatggccagcaacatccccaacggtgaccttggtgtgatcacaagcatagaggggagg
aagagcatgctaaagctggcggagcggatggtggcgagcttctgcggtggcgtgacggcg
tctgctgcacaccagtggacgacgctctcaggcagcggtgctgaagacgtgcgtgtcatg
accaggaagagcgtggacgaccccggcaggccgccgggcattgtgctcaacgccgccacc
tccttctggctccccgtcccgcccaagagggtcttcgacttcctccgtgatgaaacttct
cgcagcgagtgggacatcctctccaacggcggtgccgtccaagaaatggctcacattgct
aacggccgggaccatggcaactgcgtctcccttcttcgtgtcaatagtgcaaactcgaac
cagagcaacatgctgatcctgcaggagagctgcaccgacgcgtcgggatcctacgtcgtg
tacgctccggtggacgtggtggcgatgaacgtggtgctcaacggcggcgacccggactac
gtggccctgctgccttcaggcttcgccatcctccccgacgggccaccaggcgctgctccc
catggagagagcggcagcctggaggctggcggcgggtccctcctgacggtggcgttccag
atcctggtggactctgtccccaccgcaaagctctcgctcggctccgtcgccaccgtgaac
agcctcatcgcctgcaccgtcgaccgcatcaaggccgccgtctgcgcggaaggcaaccca
cagcagccatccatatga
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