Setaria italica (foxtail millet): 101757245
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Entry
101757245 CDS
T02818
Name
(RefSeq) Fanconi anemia group D2 protein homolog isoform X1
KO
K10891
fanconi anemia group D2 protein
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
101757245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sita03400
]
101757245
DNA repair and recombination proteins [BR:
sita03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
101757245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FancD2
FANCI_S2
Motif
Other DBs
NCBI-GeneID:
101757245
NCBI-ProteinID:
XP_012698992
UniProt:
A0A368PV74
LinkDB
All DBs
Position
II:complement(2887312..2898364)
Genome browser
AA seq
1488 aa
AA seq
DB search
MVFLQRSRPVNPRKRPPPPPDADPPGPAGAGHSSAVDAAAALLADAGCTLLVPAHQAPPL
PSPHAFAARLGRALSADPSAAPRLLAGVAAFASASPARLRQLLLPSAPHVPSLARALLSV
PALQPGLLALLLEKLPEHFDDGGGALDGLPLQDDVGRLIVSQFRWLDFLADADTFVEKLV
EVLSVAPPRLKKEIIGSLPEIVGDQSHAAVVAALEKLLQEDSEVVIAVLDVLSDLNLNEE
LQEQAVTVAISCIRTISPDQMPHLLRFLLLSATPANAGRIILQIREQLRLVGVVDPRAAR
SKKMKGKALANSTDGAILDTLRSGLRFKNMLCEAFLKELKSVDHPRDHKVIDVWLIMLIY
ANGGALQKSAEKILKSKILQGCIRETLFDQCIHGNTELVKEHFMLFLSMSDYLLACKEEK
AREFASYLFTALFEEFSDTYSRQELVGSLVAHIGSGVSYEVSSSLDIMISLASNHSEELI
PISSHITGILDYLESFHEDNLRKVYNIFCHLALAAGFNTGSGGSSVANELLMVVRKQVSN
PDMKYRRMGIIGALRIVSTIADVDVNAAVNCSSSQQPNCEEALELLKMSVNSCKFVTLPL
IFLYDELASLLESKVLHSAIVEWLGDYLAEFDTSFLADLNNGELSEKYLNDGIEGELWMN
LDGDLSPICVNIVPLASTLPQQSQPCLQILPSQFSLLTTVERLINEGSLGGLNALLGCPL
HLPSTKHLDGAKWGNLTGLQKKAVCHSLYYAINWIRELLNAFSTQVASRIDNFSQKARDE
TAVKLLKRLRNLIFLEGLLNAFLKKYPLSLPELRYLGDCSGSTSTSKFNLPKKMGEESMD
GTSSNKRQKGRKDKAASERMNPDDKLKQPTVLDAFKRAGVTVSQATNKASSQPSSSGMMS
KNIEQEANDPGELGFVDLMAAPVQLDMQRFKFRTLHTRCLSLLNYSECQDSSCSYLETEL
PIYLYLLRDLHNKLDNLNPTTKPFLSTYQAKCSQVYCHKSTQEFLDKIQPLFSVLRKHLD
GAVSMIKDESESCTDNWSSHSSSAGNPDIPYVVISKSSTATAVCKEILGCYRKLLAFPDL
LNQPNMSGLKQLLQNLQPTENFDDILSEFQPSLAPSNVDYLYCGACKMFEDIMDPVRSFS
YLLSSDVLITMQSIVNSVVVLLDEPGESNRKNLQIGCSKAIIPFLRKRLGQSAHKLLTAN
LPSEDAENGCQSKGDLIQKILQIYLRNSDSTSDLLHELSGALSQVPSTKAQGTQDVSNGF
PTLCSSTIPSWYRVLHEENTGSLNKMIKQALKTRGLPERGSIDTILEEIQKSVKVFVSLI
EKCKTHEKVSMHAMAVKHGGKYIDTFLKAFNFLETQFKEHNAIILQMLKELQKATRIIQT
ICAEAKGYKRTMITSKIPPAKRSMERFLFQVKALLHNCSTEKKFWMGNLKHKDLHGHVVS
SQVYGSVDEEDEEQTESDSDTPAAENDNTMDEDDAAAEGSNEAPMEKE
NT seq
4467 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcctgcagcgcagccgccccgtcaacccccgcaagcgcccgccccctccgccc
gacgccgacccccccgggcccgccggcgccggccactcctccgccgtcgacgcggcggcg
gcgcttctcgcggacgccggctgcacgctcctcgtcccggcgcaccaggccccgccgctc
ccctcgccgcacgccttcgcagcccgcctcgggcgcgcgctctccgccgacccctccgcc
gccccgcgcctcctcgcgggcgtcgccgccttcgcgtccgcctcccccgcgcggctccgc
cagctgctcctcccttcggccccgcacgtgccgagcctcgcgcgcgcgctcctctccgtc
ccggcgctccagccgggcctcctcgcgctgctcctcgagaagctgcccgagcacttcgat
gacggcggcggggcgctcgacggattgccgctgcaggacgacgtggggaggctcatcgtc
tcgcagttccggtggctcgacttcctcgccgacgccgacaccttcgtcgagaagctcgtc
gaggtgctgtccgtggcgccgcccaggctgaagaaggagatcatcggctcgctcccggag
atcgtcggcgaccagagccatgccgccgtggtcgccgcgctcgagaagctcctgcaggag
gactcggaggttgtcatcgctgtgctcgatgtattgtcggatcttaacctcaacgaggag
ctgcaggagcaggcggtgactgttgcgatatcgtgcatacggacgatttctccggaccag
atgccgcatttgctcaggttcttgctgctgtctgctacaccagccaatgctggaaggatc
atattgcagatccgcgagcagctgaggcttgttggtgttgtggatccacgggctgctcga
agcaagaagatgaaggggaaggcattggcgaacagcactgatggggcaatacttgatacg
ctgagatctggcctaaggtttaagaatatgctttgtgaggctttcttgaaggagctgaag
tcagttgaccacccaagggatcacaaagtgattgatgtttggctcatcatgcttatctat
gccaatggtggtgctctgcagaagagtgcagagaaaatattgaagtccaagatcttgcag
gggtgcatacgagagacactgtttgatcaatgcattcatgggaacactgaattggtaaag
gaacatttcatgttgttcctctcaatgagcgattacttgttggcttgcaaggaagagaaa
gctagagagtttgcatcctatttgtttacagctttgtttgaagaattcagtgatacatat
tccaggcaagagcttgtaggctcattggttgctcatataggttctggggtcagctatgaa
gtttcgtcttctctggatataatgatttctctagcatccaaccattcagaggaattgatt
cctatatcttcacatataactggaatattggattacttggagagtttccatgaagataat
cttcggaaggtttacaatatcttctgtcatttggcactagctgccggtttcaacactggt
tcaggtggctcctctgtagctaatgaacttctaatggtggtgagaaagcaggttagcaat
ccagatatgaagtataggagaatgggaataattggagctttaaggatagtttcaactatc
gctgacgttgatgtcaatgctgctgtgaactgttcatcatctcagcaaccgaattgtgag
gaggccctggaactgttgaagatgtctgttaactcctgcaaatttgtgacattgccctta
atttttctatatgatgagttagcttctttactggagagcaaagttcttcactctgcaatt
gttgagtggctaggagattatcttgcagaatttgacacatcatttcttgctgatctaaac
aatggtgagctatcagaaaaatacctgaatgatggcatagaaggagaattatggatgaac
ttggatggagatctctctccaatatgtgttaatattgtgcctctagcctccactttgcca
caacaatctcaaccctgcttgcagatcctcccatcccaattttcacttttaactacagtt
gaacgtttaataaatgaaggctcgcttggtggattaaatgcactacttggctgtcctttg
caccttccctctaccaagcatttggatggagccaaatggggaaacttaacaggattgcag
aaaaaggcagtgtgccattcactgtactatgcaataaactggatcagggagttgctcaat
gctttcagcacacaggttgcaagtaggattgataatttctcacagaaagcaagggatgag
acagcagtaaaacttctaaagcgtctgagaaatctgatatttcttgagggcttgctgaat
gcgtttctaaaaaaatatcctctatctctacctgagctgcgatatcttggggattgttct
ggatcaactagcaccagcaaattcaaccttccaaagaaaatgggagaagagagcatggat
ggcacatcttccaacaaaagacaaaagggtcgcaaggacaaggcagcttcagaaagaatg
aatcctgatgataaactcaagcaacctacggtactggatgctttcaaaagagcaggagta
acagtcagtcaagcgacaaacaaagcttcttctcaaccatcgtcaagtggaatgatgtca
aagaatattgaacaagaggctaatgatcctggtgagctagggtttgtagatttaatggca
gcaccagttcagctggatatgcaaagattcaaattcagaactctccatacaagatgcttg
tctttgttgaactactcagagtgtcaagattcatcttgttcttaccttgaaactgagcta
cctatatatctatatcttctccgtgatctgcacaacaaattagataatctaaatcccaca
accaagcctttccttagtacttatcaagcaaaatgttcgcaagtttattgccataagagc
acacaagaattccttgacaaaatccagccactattctcggttctaaggaagcatctagat
ggggcagtttcaatgatcaaagatgaatcagagagctgcacagataactggagttcacat
tcctcttcagctggcaacccagacattccgtatgtggtgatctcgaaatcatcaactgca
actgcagtatgtaaagagattcttggctgctacaggaagttactggcctttcctgatcta
ttgaatcaaccaaatatgtcaggtctgaagcaacttttacagaatttgcagccaacagaa
aattttgatgatattctttcagagttccaaccatctcttgctcctagcaatgttgattat
ctatactgtggagcatgtaaaatgtttgaggatattatggatccagtgcgctcgttctca
tatcttctgtcttctgatgtgttaattactatgcaatcaattgtaaattctgttgttgtg
ttgttggatgaacctggggaatcaaataggaagaacctacaaataggatgttccaaagct
atcattccctttctgcgaaagcgtcttgggcagtccgctcataagctgctaactgctaat
ctccctagcgaagatgctgaaaatggatgccagagtaaaggtgatcttatacagaagata
ttgcaaatatacctaagaaatagtgattccacttcagatctgcttcatgagctttccgga
gcattgtctcaggtaccttcgaccaaagcacaaggtacccaggatgtgtcaaatggtttt
ccaacactctgttcctccactatcccctcttggtaccgtgtcctacatgaggagaatacg
gggagtttaaacaagatgatcaagcaggccctcaagactagaggattaccagaaagagga
tcaattgatactattctggaggaaattcagaaatcagtgaaggtgtttgtttctctaata
gaaaagtgcaagactcatgaaaaggtatctatgcacgcaatggcagttaaacatggggga
aagtatatcgacacatttctgaaagccttcaactttctagagacacaattcaaggaacat
aatgccattatacttcaaatgctaaaagaacttcagaaagcgacaagaataatccaaact
atatgtgcggaggctaagggttacaagcggacaatgatcacaagcaaaatacctcctgca
aagagatccatggagcggttcttgttccaagtcaaggcgctgctacacaactgctccacg
gagaagaaattttggatgggcaatttgaagcacaaggacctgcacggtcatgtggtgagc
tcccaagtgtatggaagcgtggatgaggaagatgaggagcagacggagtctgactcggac
actccggctgccgagaacgacaacaccatggacgaggatgatgcggcggcggaagggagc
aacgaggcgccgatggagaaggaatag
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