Setaria italica (foxtail millet): 101758103
Help
Entry
101758103 CDS
T02818
Name
(RefSeq) transcription factor SPEECHLESS
KO
K20558
transcription factor SPEECHLESS
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
101758103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sita03000
]
101758103
Transcription factors [BR:
sita03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
101758103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
Motif
Other DBs
NCBI-GeneID:
101758103
NCBI-ProteinID:
XP_004965509
UniProt:
K3XXI2
LinkDB
All DBs
Position
IV:26541065..26543531
Genome browser
AA seq
386 aa
AA seq
DB search
MAEALCDQLFSDVDGELMHHPSDADDLFGILEAWEDCVTGGGSTPRGAEVSRTANATTPK
PPSAVGSIRRLHDRDQGDATVPAPKRQRCSPAVSSEAAAATSEDGAANNKTSHITVERNR
RKQMNEHLAVLRSLMPCFYVKRGDQASIIGGVVDYIKELQQVLQSLEAKKQRKAYTEQVL
SPRPPPPSCSPRPPLSPRPPLPPLKSTPPISPRPSVLISPRTPPTPGSPYKLRRQPPPPL
PLPLSPPGSAYASPARTPTREPSPAPSYLPSLDTIAAELCAYAARGTNKQQQAPVALPAA
AGGGGLLPDVKVEFAGANLVVKTVSHRAPGQAVKIIAALEGRSLDILDAKISTVDDTAVN
SFTIKIGIECELSAEELVQEIQQAFS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcactgtgcgatcagctcttctccgacgtcgacggcgagttgatgcaccat
ccctccgacgccgacgacctcttcggcatcctcgaggcgtgggaggactgcgtcactggc
ggtggtagtactccacgcggcgctgaagtgtcgcggaccgctaatgccacaacgcccaag
ccaccgtcggcagtgggaagcatccggcggctccatgaccgggaccagggagacgctacg
gtgccagcgccgaagaggcagaggtgctcgccagcggtgtcgtcagaagcagcggcggct
acgagtgaggatggcgcggcaaataataagacttcacacatcacggtggagcgcaaccgg
aggaagcagatgaacgagcacctcgccgtgctgcgctccctcatgccatgcttctacgtc
aagcgaggagaccaggcatccatcattggaggtgtggtggactacatcaaggagctgcag
caagtcctgcagtcgctggaggccaagaagcagcgcaaggcctataccgagcaggtcctc
agcccgcggccgccgccgcccagctgcagcccgcggccaccgctaagccctcggccgccc
ctgccgccgctcaagtccacgccgcccatcagcccgcggccttccgtcctgatcagcccc
aggacgccgccgactccaggcagcccgtacaagctccgcaggcagccgcctccgccgctg
ccgctgcccctgtcaccgccgggctcggcgtacgcgtccccggcgaggacgccgacgcgc
gagccgagcccggcgccctcgtacctgccgtcgctggacacgatcgccgccgagctctgc
gcctacgctgcccgtggcaccaacaagcagcagcaggcgccggtggcgcttcctgcggcg
gccggcggcggcggcctcctcccggacgtgaaggtggagttcgccggcgccaacctggtg
gtgaagacggtatcgcatcgcgcgccgggacaggccgtgaagatcatcgccgcgctcgag
ggccggtctctagatatcctcgacgccaagatcagcactgtcgacgacaccgcagtgaac
tccttcaccatcaagattggaatcgaatgcgagctcagtgctgaagagctggtgcaagag
attcagcaagccttctcgtaa
DBGET
integrated database retrieval system
