Setaria italica (foxtail millet): 101758207
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Entry
101758207 CDS
T02818
Name
(RefSeq) LOW QUALITY PROTEIN: cleavage stimulation factor subunit 2-like
KO
K14407
cleavage stimulation factor subunit 2
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101758207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sita03019
]
101758207
Messenger RNA biogenesis [BR:
sita03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
101758207
U7-dependent histone pre-mRNA processing factors
101758207
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
101758207
NCBI-ProteinID:
XP_012699181
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Position
II:complement(39866585..39867242)
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AA seq
215 aa
AA seq
DB search
MDGSMSTSLSLAAAAANCRCSRVVFVGNIPFHASEKELRDACELIGPIRFLRLAADPATG
KRKGYAFVEYPDDETACSAXHNLNAHPLRGRELRVGLAGRRRRHRGDDEAVALEDAIHAA
SLVAGTPPLDSITRYLAARSPRELREMVAALEGDGPNTLKLLEQHVPGLATVMEQVRHLI
GMAAADEAAEEAKIKKRAAAAEWTTITAPSSPRWT
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggacggcagcatgtctacttccctgtccctggcggccgccgcagccaactgccgctgc
agccgcgtcgtgttcgtcggcaacatcccgttccacgcctccgagaaggagctccgcgac
gcctgcgagctgatcggccccatccgcttcctgcgcctcgccgccgacccggccaccggc
aagcgcaaggggtacgccttcgtggagtaccccgacgacgagacggcgtgcagcgccntc
cacaacctcaacgcccaccccctgcgcggccgcgagctccgcgtcggcctcgccggccgg
cgccgccgccacaggggcgacgacgaggccgtcgccctggaggacgccatccacgccgcg
tccctcgttgctgggacgccgccactcgactccatcacgcggtacctggcggcgcgatcg
ccgcgggagctgcgggagatggtggccgcgctggagggcgacggccccaacaccctgaaa
ctgctcgagcagcacgtcccggggctggccaccgtcatggagcaggtgcgtcatctcatc
ggcatggcggccgcggatgaagccgcggaggaggccaagatcaagaagcgggcggcggcc
gcggagtggacgacgatcaccgcgccaagctcaccaaggtggacatag
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