Setaria italica (foxtail millet): 101758275
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Entry
101758275 CDS
T02818
Name
(RefSeq) E3 ubiquitin-protein ligase UPL3
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101758275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sita04121
]
101758275
Enzymes [BR:
sita01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
101758275
Ubiquitin system [BR:
sita04121
]
Ubiquitin ligases (E3)
HECT type E3
101758275
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HECT
Arm
HEAT_EZ
HEAT_2
Motif
Other DBs
NCBI-GeneID:
101758275
NCBI-ProteinID:
XP_012703026
LinkDB
All DBs
Position
I:complement(126475..148253)
Genome browser
AA seq
1854 aa
AA seq
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MGCVSSALLEEGGEDDRRRIISHHHIVSLTSSTYGILTYNSSSSSSPTSAAAAPPPPPPP
PPPPQTKPDEVINSWELMAGLHDPSTPARPPLPPSPSSSSCKPDRRRRIRFPLRPIDGNA
PSGKPPSASVLLYTTSLRGVRATFEACNAVRAALQAHGDESRQLQSLMQLCEMLSIGTED
SLAAFPVDAFVPILVGMLGREDEPATAGASPDVMLLAARALANLVDVLPSSCSAVVHYGA
IQCFCARLLTIEYMDLAEQSLQALKKISLEHPTACLRAGALMAVLSYLDFFSTGVQRVAL
STAANICRKLPSDASEFVMEAVPLLTNLLNHHDSKVLEHASVCLTRIAEAFAHYPEKLDE
LCNHGLVAQAASLISVGNSSGQASLSTSTYTGLIRLLSICASGSLLAVKTLLLLGISGTL
KDILSGSGLISGTSVAPALTRPADQMFEIVSLADDLLPHMPARIINLPTYYHAYKSSSTK
KSASIKQDGAGSSSTENERSGRERLLREHPELLQQFGMDLLPTMTQVYGSSVNAPIRHKC
LSIIGKLMYYSSAETIQSLLGTTNISSFLAGILAWKDPQVLIPALQIAEIMMEKLPETFS
KLFVREGVVHAVESLICAESSNALPSQVPPQDKDNDSPMPSRSRRQRRRGGAVPAENSSL
DESNSSNLGVTCSTTSTSEVPNTSLRFAVSDHAKSFKDKYFPTDTDSSDIGVTDDLLKLR
ALCTKFNTAIENAKTKAKGKSKAVSADCFDISFDVEEQLDEVISEMLGELSKVNGVSTFE
FIRSGVVTSLLDYLSCGTFGKEKVSEGNLPQLRQQALRRYKSFISVALSIDHERDGTPMA
LLVQKLQSALSSLERFPVVLSQSSRIGIGGSRLTSGLSALAQPFKLRLSRAQGEKSLRDY
SSNIVLIDPFASLAAVEDFLWPRVQRSEVASKPIVPSGNNSESGVPGTTAGASLTAATAH
SGRRPTTRSKSSAASSGTSKKDAHDESTSTAKGKGKAIVKPNSDESKGPNTRNAARQKSA
SEKDSEMKRAHGHSSSEDEELDTSLVEIDDALMIDDDDISEDDDDDHEVLQEGSLPICSQ
DGVHDVKLGDADENIGSASFSQAQPSSGSIARNTSSRGPDSSEFRSASTFGSRGAMSFVA
ATMAGLASVGGRSVRGSRDRRGLSLGGSMSDHNKLVFTAGGKQLSKHLTVYQAIQRQLML
DEDDEERFNGSDLSNDGNRFWGDVFTITYQKADNQAEKGSQGGSTSLNSKSDSCRSISEM
QGVSLLDSILQGELPCDLERTNSTYNILALLRVLDGLNQLSSRLRAQGASDDFAEGKIRT
LDELYRTGAKVPSEEFVNSKLTPKLARQMQDVLALCSGSLPSWCYQMTKACPFLFPFETR
RQYFYSTAFGLSRALNRLQQQQSDNHSSGGEREVRFGRLQRQKVRVSRNRILDSAAKVME
MFSSQRAVLEVEYFGEVGTGLGPTLEFYTLLSHELQSSQLGLWRSTSPYDSGLQIDRSDA
INLDPEDGLSGKELNSDLPGDGRHLIQAPLGLFPRPWPPKADSSEGTRFFKVLEYFRLIG
QVMAKVLQDGRLLDLPLSTAFYKLILGQELDLFDIVSFDSEFGKTLQELRVLVERKKFLE
STPGENQLEVADLRFRGAAIEDLCLDFTLPGYPDYVLKEGEGSTIVNIYNLEEYISLLVD
ATVKSGIKRQIEAFRSGFNQVFDISSLQIFSPQELDYLICGRQEIWEPESLVDNIKFDHG
YTAKSPAIVNLLEIMVEFTPEQQHAFCQFVTGAPRLPPGGLAALSPKLTIVRKHPSSVVN
TSNSTGVTEPADDDLPSVMTCANYLKLPPYSTKEIMRKKLLYAILEGRGSFDLS
NT seq
5565 nt
NT seq
+upstream
nt +downstream
nt
atggggtgcgtgtcctcggcgttgctggaggaaggcggcgaggacgaccgccgccgcatc
atctcccaccaccacatcgtctccctcacatcctccacctacggcatcctcacctacaac
tcctcctcctcctcctctcccacctccgctgctgctgcgcctccgccgcctcctcctcct
ccccctcctccccaaacgaagccggatgaggtcatcaactcctgggagctcatggccggc
ctccacgacccctccaccccggcaaggcctcccttgcctcccagtccatctagttcctcg
tgcaagcccgaccgccgccgccgcatccgcttccccctccgcccaatcgacggcaacgct
cccagcggaaagcctccatccgcgtccgtgctgctctacaccacctccctccgcggggtc
cgcgccaccttcgaggcctgcaacgccgtccgcgccgcgctccaggcccacggcgacgag
tcgcgccagctccagtccctcatgcagctctgcgagatgctctccatcggcaccgaggac
tccctcgccgccttcccagtcgacgccttcgtccccatcctcgtcggcatgctcggccgc
gaggacgagcctgccaccgccggcgccagccctgacgtcatgctgctcgccgcgcgggcc
cttgccaacctcgtcgacgtgctcccctcctcctgctccgcggtcgtgcactacggggcc
atacagtgtttctgtgctcgcctgctaaccatcgagtacatggacctcgccgagcagtct
ctacaagctcttaagaagatctctctggagcacccaaccgcgtgtctgcgtgctggggcg
ctaatggctgtcctatcgtatctcgacttcttctccactggtgttcagagagtagcattg
tctaccgctgcaaatatctgcaggaagctgccgtccgatgcttccgagtttgtcatggaa
gctgtccctctgctcacgaatctcctgaaccaccatgattccaaggtactggagcatgct
tctgtttgtttgacacgcattgctgaagctttcgcccattacccggagaagcttgatgag
ctctgcaatcacggattggttgctcaagctgctagcttgatatctgttggcaactcctca
ggccaggcatcactgagtacatccacatacacaggcttaatccgtcttctctcaatatgt
gcaagtggatcactgctggcagttaaaacactacttcttcttgggatcagcggcactctt
aaagacatcctttctggctctggtttgatttctggaacgtcagtggcccctgctctaaca
aggcccgctgatcagatgtttgagatagtgagccttgctgatgatttgcttccacatatg
cctgcgagaatcatcaatttgccaacgtactaccatgcttataaaagctcttcaacaaag
aaatctgcttccatcaaacaagatggggctggttcaagttcaacagaaaacgagaggtct
ggccgtgagaggctattgcgtgagcaccctgaacttctacagcagtttggtatggatttg
ttaccgacgatgacacaggtgtatggttctagtgtaaatgcaccgatacgtcacaagtgc
ttatcgattattgggaagttaatgtactacagctccgctgaaacaatccaatctctcctt
ggcacaacaaacatatccagcttcctcgcaggcattcttgcatggaaagatccccaagtg
ttgattcctgctcttcagatagcagaaataatgatggaaaagcttccagagacattttct
aagctgtttgtgagggaaggtgttgttcatgctgtggagtcacttatatgtgcagaatcc
tccaatgcactgccttctcaggtaccaccgcaggataaagataatgattctcccatgccg
tcacgttctaggcgtcaacgcaggcgtgggggtgctgtgccagcagaaaacagttcatta
gatgaatcaaacagttccaatcttggggttacctgctcaacaacaagcacttccgaagtt
ccaaacaccagcctgcgatttgcagttagcgatcatgcaaagtctttcaaagataaatac
ttcccgacggacactgattcaagtgatattggagttactgatgaccttcttaaactgaga
gcactctgcacaaagttcaatactgcaattgagaatgccaaaacaaaagccaaagggaaa
tcaaaagctgtaagtgccgattgttttgacatctcatttgatgtggaagaacaattagac
gaagtgatatctgaaatgctcggtgagcttagcaaagttaatggtgtctccacatttgag
ttcattagaagtggagttgtcacatcattgcttgactatttgtcctgtgggacgtttggg
aaggaaaaggtatctgaaggaaacctaccacagcttcgtcagcaggcccttaggcgatac
aagtccttcatatctgttgccctttctattgatcatgaaagggatggaactcccatggca
ctgttggttcaaaaactacaaagtgcattgtcttcgttggaacgtttccccgttgtgctt
agccagtctagcaggattggtattggaggctcccgtctgacctcaggtcttagtgctctg
gctcagcccttcaagttgcgtctgtcacgagctcaaggtgaaaaatcacttcgggattat
tcatcaaatattgtgcttattgacccatttgccagtctagcagctgttgaagacttcctt
tggcccagagttcagcgcagtgaggttgcttcgaagcctatagttccatctggaaataat
tctgaatcaggggttcctggcaccacagctggtgcatcattaacagctgcaacagctcat
tctggtcggcgtccaacaacaagatcaaaatcatctgctgcaagtagtggtacatctaaa
aaggatgctcatgatgaaagcactagtactgccaaaggaaaaggcaaagctatagtaaaa
ccgaactcagatgaatcaaagggacctaataccaggaacgctgcccgccaaaaatctgct
tcagagaaggattcagaaatgaagcgagcgcatggtcacagtagctctgaggatgaagag
cttgacacatctctcgttgagattgatgatgctttaatgatcgatgatgatgacatttca
gaggatgacgatgatgatcatgaggttctccaagaagggtctcttcctatctgttctcaa
gatggtgtgcatgacgtgaaattgggtgatgctgatgagaacattgggtcagccagtttt
agccaggcgcagccgtcatctggctccattgctagaaacacatctagcaggggaccagat
tcttctgaatttcgaagtgcaagcacatttggttcacgaggtgcaatgtcatttgttgct
gcaacgatggctgggctggcttctgtcggtggtcgcagtgttagaggtagccgagatcgg
cgtggtctgtcacttggaggtagcatgagtgatcacaataaactcgtattcactgctggt
gggaagcagctcagcaaacatttgacagtgtatcaagctatccaacgtcaattgatgctt
gatgaggatgatgaagaaaggttcaatggatctgatttatccaatgatggaaaccgcttc
tggggtgatgtgttcacaataacgtaccagaaggctgataaccaagctgagaagggatcc
caggggggttccacctcattaaactcaaaatcagattcttgcaggtctatctcggaaatg
cagggtgtttctcttcttgatagcatcttacaaggagaactcccttgtgatcttgagaga
acaaactcaacatacaacattttagcactgttacgtgtactggatgggcttaatcagtta
tcctctcgtttaagagcacaaggagcatctgatgattttgctgagggaaaaatcaggacc
cttgatgagctatatagaactggagccaaggtaccttccgaggagtttgtcaatagtaag
ttgacgccaaagcttgctcggcaaatgcaggatgttcttgcactctgtagtggcagttta
ccttcttggtgctatcaaatgaccaaggcctgcccatttctgtttccttttgagacaagg
aggcagtacttctactccacagcctttgggttgtcacgagcattgaatcgactccagcaa
cagcagagtgacaatcacagctctggtggtgaaagagaggtccggtttggcaggttacaa
cgccagaaagttcgtgtttcccgtaaccgtattctggattctgctgctaaagttatggag
atgttctccagtcagagggctgttcttgaggtggaatactttggtgaagttgggaccggg
ctggggcctactttggagttttatactcttttaagccatgaactacaaagttctcagctg
gggttatggagatctacttctccatatgattcaggattgcaaattgataggagcgatgca
attaatttagaccctgaagatggcttatcaggaaaagaactcaactcagacttacctggt
gatggcaggcatttgatacaagctcctctcggattgtttcctcggccttggccacctaaa
gcggattcttcagaaggtaccagattcttcaaagttttggagtatttccgcttaatcggt
caagtgatggcaaaagtcttgcaagatggcagacttttagatttgcctttatcaactgcg
ttttataagctgatccttggacaggagcttgatttgtttgacatagtctcatttgattct
gagtttgggaagacattgcaagaactgcgagttcttgttgaacgaaagaagttccttgag
tccactcctggcgagaatcagcttgaagttgcagacttgcgtttccgtggtgctgctatt
gaagatttgtgtttagattttactcttccgggttatcctgattatgttcttaaagagggt
gaaggaagcacaattgttaacatttacaacttagaagagtatattagtttgctagtggat
gctacagttaagtcagggataaagcgacagattgaggcatttagatcagggtttaatcag
gtttttgacatctcgtccctccaaatattttcacctcaagaacttgactatctaatatgt
ggccgacaagaaatttgggagccggaatccctggtggataacataaaatttgatcatggg
tatactgctaaaagtcctgcgatcgtgaatctgcttgagattatggtggaattcacccct
gagcagcagcatgcgttctgccagtttgtaactggtgctcctcgccttccacctggtggt
ttggcggcccttagtcccaagcttacaattgttaggaagcatccttcaagtgtggtaaat
acttcaaattcaactggggtgacagagcctgcggatgatgatttgcctagtgtgatgacg
tgcgctaattatctgaagctgcctccgtactccacaaaagaaatcatgcgcaagaagctg
ctttatgcaatcctggaaggccgaggatcatttgatctttcataa
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