Setaria italica (foxtail millet): 101758288
Help
Entry
101758288 CDS
T02818
Name
(RefSeq) cryptochrome-1 isoform X1
KO
K12118
cryptochrome 1
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
101758288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
Cryptochrome_C
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
101758288
NCBI-ProteinID:
XP_004952853
UniProt:
A0A368PN78
LinkDB
All DBs
Position
I:28379422..28383410
Genome browser
AA seq
706 aa
AA seq
DB search
MSASQSSMSGAGEAGVRTLVWFRRDLRVEDNPALAAAARKAGEVVPAYVWAPEEDGAYYP
GRVSRWWLSQSLKHLDASLRRLGASRLVTRRSDDAVVALLDLVRSTGATHLFFNHLYDPL
SLVRDHRVKELLTAEGITVQSFNSDLLYEPWEVLDDDGCPFTMFAPFWNRCLCMPDPAAP
LLPPKRINSGDLSRCPSDELIFEDESERGSNALLARAWSPGWQNADKALTAFLNGPLIDY
SMNHKKADSASTSLLSPYLHFGELSVRKVFHQVRMKQLMWSNEGNHAGEESCTLFLRSIG
LREYSRYLTFNHPCSHEKPLLSHLRFFPWVVNEVYFKVWRQGRTGYPLVDAGMRELWATG
WLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYISGSLPDGRELDR
IDNPQFEGYKFDPHGEYVRRWLPELARLPTEWIHHPWDAPESVLQAAGVELGSNYPRPIV
ELDAANSRLQDALSEMWELEAASRAAMENGMEEGLGDSSDVPPIAFPQELQMEVDRQPVR
HATQTPMMAGRRREDQMVPSMTSSFIRAETELTADFGNISEDSRPEVPSNMHLQPRTERE
ETVDGGTANAVRMNGNHQQHNFQNNTHRVLGVAPSVSEASSSWTGREGGVVPVWSPPAAS
GHSDPYAADEADISSRNYLDRHPQSHTMMNWSQLSQSLTTGWEVDN
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgtcgcagtcgtcgatgagcggcgccggggaggcgggggtgcggacgttggtg
tggttcaggcgggacctgcgggtggaggacaacccggcgctggcggcggccgcgcggaag
gccggggaggtggtgcctgcctacgtgtgggcgccggaggaggacggggcctactacccc
ggcagggtgtcccggtggtggctcagccagagcctcaagcacctggacgcctcgctccgc
cggctcggggccagccgcctcgtcacccgtcgctccgacgacgcagtcgtcgctctgctc
gacctcgtccgcagcaccggcgccacgcacctcttcttcaaccacctctacgacccactg
tcgctggtccgggaccaccgcgtgaaggagctgcttacggccgagggcatcaccgtgcag
tccttcaactccgaccttctgtacgagccgtgggaggtcctcgacgacgacggctgcccc
tttaccatgttcgcacccttttggaacaggtgcctgtgcatgcccgaccctgcagcgcca
ctgctgccgcccaagaggatcaattcaggtgacttgtcgaggtgcccatccgacgagctg
atatttgaagacgagtccgaaaggggaagcaatgcgctgctggcacgggcatggtcaccg
gggtggcagaatgctgacaaggcgcttactgccttcctcaatggcccattgatcgactac
tctatgaatcacaagaaggctgacagcgcgagcacatccctgctgtccccatacctgcac
ttcggtgagctcagcgtccgcaaggtcttccatcaggtccggatgaagcagctgatgtgg
agcaacgaaggcaaccacgctggcgaggagagctgcactctgttcctccgctccatcggc
ctgcgggagtactcaaggtacctcaccttcaatcacccctgcagccatgagaagccgctc
ctgtcgcacctcaggttcttcccttgggtcgtcaacgaggtatacttcaaggtttggagg
caggggagaactggctaccctcttgtcgacgctggcatgagggagctctgggcaactggg
tggctgcacgatcgcatacgtgtggtggtctcgagtttttttgtcaaggtgctccagttg
ccatggcgctgggggatgaagtatttctgggacaccttgctggatgctgacctcgagagt
gacgcgctaggttggcagtacatttccgggtccctccctgatggccgcgagcttgaccgc
atcgacaaccctcagtttgaagggtacaagtttgacccacatggggagtatgtccggcga
tggctaccagagctggcgaggttgccaacggaatggatacaccacccctgggatgcacct
gagtctgtgcttcaagctgcgggagttgagctaggctccaactatcctcgccccattgtt
gagttagatgcagccaattccaggttacaggatgccctgtcagaaatgtgggagcttgag
gcggcctctcgggctgcgatggaaaatggaatggaagaaggccttggcgactcctcggat
gtgccaccaatcgccttccctcaagaattacagatggaagtggaccgacaaccggtccga
catgctacccagacaccgatgatggctggtcggagacgagaagatcagatggtgcctagc
atgacttcttcattcattagagctgaaacagaactcactgcggattttggcaacatcagt
gaggacagtaggccggaggtgccatcaaacatgcatttgcagcctcggacggagagggaa
gaaacggttgacggtggcactgccaatgctgtcaggatgaatggcaatcatcagcagcat
aactttcagaacaacacacaccgggtgctaggtgttgctccatcggtttcagaggcatcg
agcagctggacgggcagagaaggtggagtggtaccggtctggtcaccaccggcagcttca
ggacattctgatccttatgctgctgatgaggctgacatttccagtaggaattatttggac
aggcacccgcaatcacatacgatgatgaactggagtcaactctctcagtcattgacaaca
gggtgggaagtggataattga
DBGET
integrated database retrieval system
