Setaria italica (foxtail millet): 101758731
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Entry
101758731 CDS
T02818
Name
(RefSeq) uncharacterized protein LOC101758731 isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03013
Nucleocytoplasmic transport
sita03015
mRNA surveillance pathway
sita03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101758731
09122 Translation
03013 Nucleocytoplasmic transport
101758731
03015 mRNA surveillance pathway
101758731
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sita03019
]
101758731
03041 Spliceosome [BR:
sita03041
]
101758731
Messenger RNA biogenesis [BR:
sita03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101758731
Spliceosome [BR:
sita03041
]
Complex C
Other components
EJC/TREX
101758731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP
RSB_motif
Motif
Other DBs
NCBI-GeneID:
101758731
NCBI-ProteinID:
XP_012698950
UniProt:
A0A368Q8B7
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Position
II:complement(46147959..46153199)
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AA seq
772 aa
AA seq
DB search
MVAELKDELQRRNLPVSGLKNDLVKRLFEAIQDKILDDGEKTNGGIPPEELKGGETPGSV
DASVNQASIKELVDEGASEVMKQGADLVISVTEAYDESILTTSEVTQEAVVGTPEASQRS
LDAVARVESSLVDTAATDETNGNGLESASSGDTIVEEANPRSDNHCDTIEQTPEDDTNKK
LAIDDIPSDGTGGDIKLGLNMHIKILEMGDVYAPSDDTVLGADPEDADAVVAAEPEDDTS
KKMTIDGVLSDANHTTVKLGVNVDCKIEQEKVPALPDAIELNADPKGADVVVAAENMIPK
DNFSVNTLMHGNGHGDFKCSNGDTKPFLCREKDQVSEVNPDLDSQTKCVSIFDDNISADK
NNDLKGNLNADDCDLELDAKQEMVKPSSTIPSPGDLLEVLDVDKEVHKIGATLQELGSTS
NIDLDRDEESPDGSSIEKLNFDSCSGDESMDEDVLESKHIDSNIKSDDLGEKTEFTSEHG
LKEVSLLDTAAEDSSAHTKEVVVEEKPPSPAEKRKPEDQEVIANNEPIKRQRLRNVNDVD
ISEQKAPKLTGTGTTKEVFHYAPSHSFGRPGTTASRDYPKERIVPPAQKPATTSLRIDRF
VRPFTLKAVQELIGKTGSVCSFWMDHIKTHCYVTYSSVEEAVATRNAIYNLQWPPNNRNY
LVAEFVDPEEVELKLEAPPPSQVPISLSTAIAPQAAPFQQPNANQTLPPQPAAALLPTPA
PLAKLPPISGPGPAREMLLPPPPRNLEPPRTLDDLFKKTQVHPRIYYMPLSE
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggttgctgagttgaaggatgagcttcagcgaaggaatctacctgtcagtggtttgaag
aatgatcttgtgaagaggctctttgaggccatccaggataagatacttgatgatggggaa
aaaacaaatggtggaattcctcctgaggagctgaaagggggtgaaacccctggttctgtt
gatgcatctgttaaccaggcttcaatcaaagaacttgttgatgaaggtgcttcagaggtt
atgaaacagggggcagatcttgttatctctgttacagaagcttatgatgaaagtatatta
actacttcagaagttactcaggaggctgtggttggtactccagaagctagtcagagaagt
ttggatgctgttgcaagagttgagtcttctctagttgatacagcagcaactgatgaaacc
aatggaaatggcctagaatcagcttcaagtggcgacactatagtggaggaagcaaatcca
cgttctgataatcactgtgataccatcgagcagaccccagaagatgacaccaacaagaaa
ctggctattgatgatataccttctgatggtactggtggtgacatcaagttaggccttaat
atgcacatcaaaattctagaaatgggagatgtatatgcaccttctgatgataccgtattg
ggtgctgatcctgaggatgctgatgctgttgtggctgctgaaccagaagatgacacaagc
aagaaaatgaccattgatggtgtattgtctgatgctaaccatactactgtcaagctaggt
gtcaatgtagactgcaaaattgaacaggaaaaagtaccagcactgcctgatgctattgaa
ttgaatgctgatcctaagggtgctgatgttgttgtggcagcagagaacatgattcctaaa
gataatttcagtgtgaatactttgatgcatggcaatggccacggagactttaagtgctct
aatggggacaccaagcccttcctgtgcagagaaaaagaccaggtatctgaggtcaaccca
gatctagattctcaaactaagtgtgtatcaattttcgatgataatatatctgctgacaaa
aataatgatctaaagggtaacctgaatgctgatgattgtgatttagaactagacgcaaag
caggagatggtcaaaccatcatccaccattccctccccaggtgatcttttggaagtgttg
gatgtcgacaaagaggtgcataagattggtgccactttgcaagagttaggctccacaagt
aatatagacttggacagagatgaggagagtcctgatggtagttctattgagaaactgaat
tttgatagttgttcaggtgatgaatcaatggatgaggatgtgttggaaagtaagcacatt
gattccaatatcaaatctgatgatcttggagagaagacagagtttacctcagagcatggg
ttgaaagaggtgtctctccttgatactgctgctgaggattcctctgcacacacaaaggaa
gttgtagttgaagagaagccaccaagtccagctgaaaagaggaaacctgaagatcaagag
gtcattgcaaataatgagccaatcaaacggcagcgcctacggaacgtgaatgatgtcgat
atttctgaacaaaaagcacccaaattaactggcaccggtactacgaaggaagtctttcat
tatgctccgagccattcttttggcaggcctggcacaacagcaagcagagattatccaaag
gagcgaatagtaccacctgctcaaaaaccagcaacaacttccttaagaattgatcgattt
gtgcgcccatttactctgaaagctgtgcaagaacttattggtaaaactggatctgtttgt
agcttttggatggatcatatcaagacccactgctatgttacttactcttcagtggaggaa
gcagtggctacgaggaatgctatctacaacctccagtggcccccaaacaaccgcaactat
ctggtcgctgaatttgtcgatccagaagaggtggagctcaaacttgaagcccctccccca
tctcaagtgcctatcagcttgagcacagctatagcaccacaggcagcacccttccaacaa
cccaatgctaaccaaaccctacctccccaacctgctgctgctctgttgccaactccagca
cctcttgccaagctgccgcctatctctggccctggaccagcaagagagatgcttcttccc
cctcctccaaggaacctggaacctccccggacactggatgatctcttcaagaagacacag
gtgcatccaaggatttactatatgcccttgtccgaatag
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