Setaria italica (foxtail millet): 101758823
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Entry
101758823 CDS
T02818
Name
(RefSeq) LOW QUALITY PROTEIN: elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
101758823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sita03009
]
101758823
Ribosome biogenesis [BR:
sita03009
]
Eukaryotic type
Pre-60S particles
GTPases
101758823
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFL1
EF-G_D2
EFG_III
GTP_EFTU_D2
EFG_IV
Motif
Other DBs
NCBI-GeneID:
101758823
NCBI-ProteinID:
XP_022684169
LinkDB
All DBs
Position
I:complement(26563622..26566652)
Genome browser
AA seq
1009 aa
AA seq
DB search
MAAAAAADPRLVRNTCILARVDHGKTSLADHLVASGGDGLLHPKLAGSAMFMDHLPEEQR
RAITMKSSSVALRHAHPTGVHRVHLIDSPGHADFCSEVSAAARLSDSALTVVDAAKCVRV
QTHAALRQAFVECLRPCLVLNKLDRLITDLLLSPEEAYALLGRTLAEVNSIYSALRSGSY
FSSLLQDDDGRLAGGGGGGDDEDEDDXHTFHPHKGNVVFTCARDGWGFRIHRLADLYAQK
TGASKARLLRGFWGPYYIDKEKKXGSASDGSADQQPAFVQNVLKPLWKLYQRGLMPNSSE
WMHNNVVSVFNQVSPLELHSKEPKVSLHAVLRAWLPLAESVMEMLVECTPDPVAAQAFRV
PRLMPERRVAASGCASIVTEAEQVRSCVAACSTSKSAPVVVFVSKMFAVPYSMLPSKGLN
GEHLNHNHGHNELEPDEECFLAFARVFSGVLRAGQKVFVLSPLYDPVKGDDASGKHVQEV
ELHCLYEMLGQDLLPVDSVAAGNVVAIQGLGQHVLKSATLSSTKNCWPFSSMTSQLSPML
KVAVEPSNPADLGDFLKGLKLLNQADPLVVYTVSQRGEHVLAAAGEVHLERCIKDLQERF
ANVQLEVSKPLVSFKETIQGECVSLMGSMKAQQGFVERTTPNGRFTVRVQVINLPNALTK
VLAENEELLGQIIEGESSQFAQDGSNSTATLRQRVISAIDSEVEAISEQVEKEKLERCRK
TLLGYLQRIMALGPSHVGPNFLLLPDLKSTSGVTASQNGWGGILVSSRCHVSERLGFVSA
SDAETKNHVNSETQASTYSLDFEALRNSIVSGFQFATNAGPICDEPIRGVAFVVESYISV
NNSDAVAPMKSSLQVITVVKEACREAVLQSKPRLVEPIYFCELTTPMEQVHAAFSVLRDC
RAKVLXTSLFTVHAHLPVAESSEFAEKLRKRTSGAASAILAFSHWESISQDPFFTPKTQE
ETEEFGDRSSIGPNLAKKLMNSVRRRKGLHVEEKVVEHGTKQRTLARKV
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcggctgccgacccccgcctcgtgcgcaatacttgcatcctagcccgc
gtggaccacggcaagacctccctcgcggaccacctggtggcctccggcggcgatgggctc
ctccacccgaagctggccggcagcgccatgttcatggaccacctgccggaggagcagcgg
cgcgccatcaccatgaagtcctcctcggtcgcgctccggcacgcgcaccccacgggcgtc
caccgtgtgcacctgatcgactccccgggccacgccgacttctgctccgaggtctccgcc
gcggcgcgcctctcggactcggcgctcaccgtcgtcgacgccgccaagtgcgtccgcgtc
cagacccacgccgcgctgcgccaggcgttcgtcgagtgcctgcgcccctgcctcgtcctc
aacaagctcgaccgcctcatcaccgacctcctcctctcgcccgaggaagcctacgcgctc
ctcggccgcaccctcgccgaggtcaactccatctactccgcgctgcgctccgggtcctac
ttctcctccctcctccaggacgacgacggccgcctcgcgggcggcggcggcggcggcgac
gacgaggacgaggacgacnggcacaccttccatccccacaagggaaacgtcgtcttcacc
tgcgcacgcgacggctggggcttccgcatccaccgcttggccgacctgtacgcccagaaa
accggcgctagcaaggccaggcttctcaggggtttctggggcccctactacatcgacaag
gagaagaagngcggttctgcctctgacggcagcgcggaccagcagccggcgttcgtgcag
aacgtgctcaagccactgtggaagctgtaccagaggggcctgatgccgaacagctcagag
tggatgcacaacaacgtcgtgtccgtcttcaatcaggtgtcaccgctggagctgcacagc
aaggaacccaaggtctcgctgcacgccgtgctgcgggcgtggctgccgctcgcggagtcg
gtcatggagatgctcgtcgagtgcacgcccgaccccgtcgccgcccaggcgttcagagtg
ccaaggcttatgcctgagaggagggttgctgccagcggttgcgccagcattgtcaccgag
gcggagcaggtgaggagctgtgtggcggcctgcagcacaagcaaaagcgcgcccgtggtg
gtgttcgtgtccaagatgtttgcagttccatactcgatgctgccgtccaaggggcttaat
ggggagcacttgaaccacaaccatgggcacaacgagttggagccggatgaggagtgcttc
ctggcgttcgcgagggtcttcagcggggtgctccgtgcagggcagaaggtgttcgtcctg
tcgccgctgtatgatccggtaaaaggggatgacgcgtcgggcaagcatgtgcaggaggtg
gagttgcactgcctgtacgagatgcttgggcaggacctgctgccggttgacagtgtggct
gccggcaatgttgttgcgattcagggccttggccagcacgtgctgaagagtgcaacgctg
tcgtcgaccaagaattgctggccattctcgagcatgacgtcccagttgtcgccgatgctc
aaggtcgcagttgagccctccaatcctgctgatctgggagactttctgaaaggactgaag
cttcttaaccaggcagacccgttggttgtgtacactgtctcgcagaggggcgagcatgtc
cttgctgcagctggcgaggtgcatttggagcgctgcatcaaagatttgcaggagaggttc
gccaacgtccagctggaggtctcaaagccattggtatcattcaaggagaccatccaagga
gagtgtgttagcttaatgggaagcatgaaggctcaacaggggtttgttgagaggaccact
ccgaatgggagattcactgtgagagttcaagtcatcaatcttcccaatgcactgaccaag
gtccttgcggaaaatgaagaattgcttggtcaaatcattgagggggaaagttcacaattt
gctcaggatggtagtaattcaacagcaacgcttaggcagcgtgtgatcagtgccattgac
agtgaagtggaagcgatctctgagcaagtggaaaaggagaaacttgagaggtgtaggaaa
acattgctgggataccttcaaagaatcatggccctaggtccttcacatgttgggccaaac
ttccttctcttgcctgacttgaaatcaactagtggtgtcacagcaagccaaaatggatgg
ggaggtattcttgtgagtagtaggtgtcatgtctcagagaggttggggtttgtgagtgca
tctgatgcagaaaccaaaaatcatgtaaacagtgaaacacaggcatcaacgtattctctt
gattttgaggcactaaggaacagcattgtctcaggttttcagtttgccacaaatgcaggt
cccatatgtgatgaacctataaggggtgtggcgttcgttgttgagtcctacatttctgtc
aacaactctgatgctgtagctccgatgaaatcttcactgcaagtaattactgtagtgaag
gaagcatgccgagaagctgttcttcagagcaagccaaggcttgtggaaccaatctacttt
tgtgaattgaccacaccgatggagcaggtacatgccgcattttctgttctgcgtgattgt
cgagccaaggtgcttngtacatctttgttcacagtgcatgctcacttgccagttgccgag
agctctgagttcgctgagaaacttaggaagcgaacgtcaggtgcagctagtgcgattcta
gcttttagccactgggaatccatctctcaggaccctttctttaccccgaaaacgcaggaa
gagactgaagaatttggtgatcgctcaagcattgggccaaacttggctaagaagctcatg
aattctgtgaggcgaagaaagggcctacatgttgaagagaaagttgtggagcatggcacg
aaacagcgaactcttgcgaggaaagtgtaa
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