Setaria italica (foxtail millet): 101759035
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Entry
101759035 CDS
T02818
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101759035
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sita01002
]
101759035
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sita04121
]
101759035
03036 Chromosome and associated proteins [BR:
sita03036
]
101759035
03400 DNA repair and recombination proteins [BR:
sita03400
]
101759035
Peptidases and inhibitors [BR:
sita01002
]
Metallo peptidases
Family M67
101759035
Ubiquitin system [BR:
sita04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
101759035
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
101759035
BRISC complex
101759035
Chromosome and associated proteins [BR:
sita03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
101759035
DNA repair and recombination proteins [BR:
sita03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
101759035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
Motif
Other DBs
NCBI-GeneID:
101759035
NCBI-ProteinID:
XP_004961351
UniProt:
A0A368QG69
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Position
III:complement(11827120..11832489)
Genome browser
AA seq
430 aa
AA seq
DB search
MSLTSVKIGEEVWLTCLSHALTTETEEVMGLLLGDIEPSSKGGATAVIWGASPQMRCERK
KDRVEVNPELLAAASAQAERMTATIKKTTRVIGWYHSHPHITVLPSHVDVRTQAMFQLLD
TGFVGLIFSCFSEDAQKVGKIQVIAFQSQGGQQRAALPLAIAPVIDLDSSWSSSENAFTP
HSAFEGIEQDTGDSRASKNSKAWGRSPDMDFYSHPDTNHSAKHQPRENAVIPYNPDNTQE
VSMDPYDSDMTPSIQEALHRSNMDISGAEYVRKEVPLIVLPTRHLLKLDTTMTSYCDMQR
VLFEEEQTAYNQAMQQNICDGKIHPLTSIHHTSTYNSSLCKLMEYCLSPAITVLQDRVKE
NELRLSMLQEEAKQLEAETLGMRNVSPRRFMNHGSVGSSSPMAQNRHPFSNQGSPRSPRS
PSGGSRRRAC
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgacctcggtgaagatcggcgaggaggtgtggctcacgtgcctctcccatgcc
ctcaccaccgagaccgaggaggtcatgggcctcctcctcggcgacatcgagccttcgagc
aagggcggcgcgaccgccgtcatatggggggcgtcgccgcagatgaggtgcgagcggaag
aaggaccgcgtcgaggtcaaccccgagctgctcgccgccgcgtcggcgcaagccgagaga
atgacggccaccattaagaaaactacaagggtgatcggatggtaccactcgcaccctcac
atcactgtgctgccgtctcatgtagatgttcgtacccaagcaatgtttcagttgctggat
acaggctttgtggggctgatattttcttgttttagcgaagatgctcaaaaggttggaaaa
atccaagtgattgcctttcagtcacagggtggacaacagcgtgctgcccttcctcttgct
atagctccagtcatcgaccttgattcatcctggagttcatcagagaatgcatttacccca
cattctgcattcgaaggcatcgaacaggacacaggggattccagagcttcaaagaatagc
aaggcctggggaagatctccagatatggatttctactcccatcctgacacaaatcattca
gcaaagcatcagcccagagaaaatgctgtcattccgtacaatcctgataacacacaagaa
gtgtctatggatccatatgattcggatatgaccccaagcatccaggaagctttgcaccgg
tcaaatatggacataagcggtgcagagtatgtaaggaaggaggtgccacttattgtgctc
ccgacaaggcacctgctcaagctggacaccacaatgacctcttactgtgatatgcaacga
gtccttttcgaagaggagcaaacagcatataatcaagctatgcaacaaaatatttgtgat
gggaaaattcatccccttacatctattcaccatacatctacatacaactcttctctctgt
aaactaatggaatattgtttgagtccagctataactgtacttcaggatcgcgtgaaggaa
aatgaacttcggctatctatgttacaagaggaggctaaacaacttgaggcagagacccta
ggcatgagaaatgtttctccccgtcgctttatgaatcatgggtctgtcggcagcagttca
ccaatggcccagaacaggcatcctttctccaaccaagggagcccgaggagccctagaagc
cctagcggtggcagccggaggagggcttgctga
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