Setaria italica (foxtail millet): 101759255
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Entry
101759255 CDS
T02818
Name
(RefSeq) cryptochrome-1 isoform X1
KO
K12118
cryptochrome 1
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
101759255
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Motif
Pfam:
FAD_binding_7
DNA_photolyase
Cryptochrome_C
Acetyltransf_6
Motif
Other DBs
NCBI-GeneID:
101759255
NCBI-ProteinID:
XP_004975809
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Position
VII:21616404..21620981
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AA seq
689 aa
AA seq
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MSVSSSPMCGGGDTGMRIVVWFRRDLRVEDNPALAAAARAGGEVVPAYVWSPEEDGPYYP
GRVSRWWISQSLQHLDASLRRLGAGKLVTRRSDDAVVALLQLVRDTGATHVYFNHLYDPI
SLVRDHRLKEMLTAEGIVVQSFNADLLYEPWEVVDDEGQPFTMFAPFWNRCLSMPYDPPA
PLLPPKKINSGDLTMCPSDDLIFEDESERGSNALLARAWTPGWQNADKALTAFLNGPLAD
YSVNRKKADSASTSLLSPHLHFGELSVRKVFHLVRMKQLVWSNDGNHAAEESCTLFLGSI
GLREYSRYLSFNHPSSHERPLLAHLRFFPWVVNECYFKIWRQGRTGYPLVDAGMRELWAT
GWLHDRIRVVVSSFFVKVLQLPWRWGMKYFWDTLLDADLESDALGWQYITGSLPDGRELD
RIDNPQFEGYKFDPHGEYVRRWIPELARLPTEWIHHPWDAPVSVLQAAGIELGSNYPLPI
IELDAAKARLQEALSEMWQLEAASRATMNNGMEEGLGDSSEVPPIEFPRELHMEIDRQPA
QATANVPTTARRRQDQMVPTMTSSLNRAETAVSADLGNSEDTRAQVPFHAHIEPRVQRED
ANAIQNAEGPALRIHGVHQPNFFQQPQHRRREAVAPSVSEASSSWTGREGAVVPVWSPPA
ASGHSETFAADEADVSSRSYWIGIHSRTG
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtctcgtcctcgcccatgtgtggcggaggggacaccgggatgaggatcgtggtg
tggttccggagggacctcagggtggaggacaacccggcgcttgcggcggccgcgcgcgcc
ggcggggaggtggtgccggcgtacgtgtggtcgccggaggaggatggcccttactatccg
gggcgagtctcccggtggtggatcagccagagcctgcagcatctggacgcctcgctccgc
cggctaggggcaggaaagctcgtcacgcggaggtcggacgacgccgtcgtcgcgctgctc
cagctcgtccgcgacaccggcgccacgcacgtctacttcaatcatctctacgacccgatc
tcactggtcagggaccaccggctgaaggagatgctgacggctgagggcatcgttgtgcaa
tctttcaatgcagatctgctgtatgagccatgggaagttgtcgatgatgaagggcaacca
ttcaccatgtttgccccgttctggaacaggtgcctaagcatgccgtatgatccccccgcg
ccacttctgcccccaaagaagatcaattcaggtgacttaacaatgtgcccatcggatgat
cttatctttgaggatgagtcagagaggggaagcaatgctcttctggcccgagcatggaca
ccaggatggcagaatgcagacaaggccctaacggccttcctcaacggtccactggctgac
tattcagtgaaccgcaagaaggctgatagtgcgagcacatccctactgtcacctcacctt
catttcggtgagcttagcgtgcgcaaggtcttccatctagttcgtatgaagcagcttgtg
tggagcaacgacggcaaccacgctgctgaggagagctgcaccctgtttctcggttccatt
ggcctgcgggagtactcccggtatctgagcttcaaccatccaagcagccatgagaggccc
ctcttggcacacctcaggtttttcccctgggtggtcaatgagtgctacttcaagatttgg
aggcagggaaggactgggtacccgcttgttgatgctggcatgagggaactgtgggcgaca
gggtggttgcatgaccggatacgtgtggtggtgtcaagcttctttgtcaaggtccttcaa
cttccatggcgatggggtatgaagtacttttgggacactttactggatgctgatcttgag
agtgatgcactgggctggcagtacatcactggctctcttcctgatggccgagagcttgac
cgcattgacaaccctcagtttgaaggctacaagttcgacccacatggggagtatgtgcga
cggtggattccggagcttgcaaggctgccgacagaatggatacatcacccatgggatgca
cctgtttccgtgctgcaagctgcaggaattgagttgggctccaactatcctctccccata
attgagctagacgcagccaaagccaggctgcaagaagccctgtcagaaatgtggcagctg
gaggccgcatcaagggccacaatgaacaatggaatggaggaaggcctcggagactcctca
gaggttccaccgattgagtttcctcgagaattacatatggaaatcgatcggcagccagcc
caggcaacggccaatgtgccgactactgctcggaggcgtcaggatcagatggtgcctacc
atgacgtcttcactgaacagagctgaaacagcggtttctgccgacctggggaacagtgag
gatactagagcacaggttccgtttcatgcacatatcgaacctcgagttcaaagggaagat
gcaaatgcaatccaaaatgcagaaggccctgctcttagaatccatggtgttcaccagcca
aacttctttcagcaacctcagcatcgtaggcgagaagctgttgcgccatcggtgtccgag
gcgtcaagtagctggaccggaagagaaggcgctgtagtcccagtttggtcacctcctgct
gcatcaggccattcagaaacttttgctgctgatgaagctgacgtttctagtaggagttat
tggataggcatccacagtcgcaccggttga
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