Setaria italica (foxtail millet): 101759289
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Entry
101759289 CDS
T02818
Name
(RefSeq) ATP-dependent DNA helicase At3g02060, chloroplastic isoform X1
Organism
sita
Setaria italica (foxtail millet)
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CarD_TRCF_RID
Cas3-like_C_2
TRCF
RecG_dom3_C
nSTAND3
Motif
Other DBs
NCBI-GeneID:
101759289
NCBI-ProteinID:
XP_004980572
UniProt:
K3ZHH3
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Position
VIII:27424989..27434305
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AA seq
729 aa
AA seq
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MIRDQQRLGLSQLRGDRGGGGGEAEADGDEEGETRRKGVAAGSSLGHRVDPRELEPGEYV
VHKKVGVGKFACISAEDGVDYVFIQYADAMAKLAVDQAARMLYRYNLPHEKKRPRNLSKL
NDPSTWEKRRLKGKLAVQKMVVNLMELYLQRMRQSRPPYPKPVAMEEFAAEFPYEPTPDQ
CQAFIDVEKDLTERETPMDRLICGDVGFGKTEVAMRAIFIVISAGYQAMVLAPTIILAKQ
HYDVMTERFANYPDIKVAIFSGAQTKDEKDDLITKIKNGDLHIIVGTHALLTERMAYSNL
GLLVVDEEQKFGVQQKEKIASYKSSIDVLTLSATPIPRTLYLALTGFRDASLMSTPPPER
VAVKTYVSAFSKERALSTIKFELQRGGQVFYVVPRIKAIDDVLQFLKDSLPDVPIAVAHG
KKMSKNIQFAMEKFARGEVKILVCTHIIESGIDVANANTIIVQFAELFGLAQLYQLRGRV
GRSGREGFAYLFYTDKSLLSRVATDRLGAIEEHSELGQGFHVAEKDMGIRGFGSLFGDQQ
SGDVANVGIDLFFDMLFDSLSKVDQFCLVPVPYKDVQLDINISPHLSSEYISYLENPVEL
LNEAAKAAEKDLWTLIQFTEDLRRRYGKEPRDMELLLKKLYVRRMAADLGISRVYPSGKT
IFMKTNMNKKVFRLMTEAMTSETHRNSLSFVGKEIKAELLVSLPDTLLLNWLFHCLADCY
AVIPALVKY
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcgaccagcagcgcctcggcctcagccagctccgcggggacagaggcggcggc
ggcggggaagccgaggccgacggcgacgaggagggggagacgcggaggaagggggtggcg
gcggggagctcgctggggcacagggtggacccgcgggagctggagcccggggagtacgtc
gtgcacaagaaggttggcgtcggcaagttcgcctgcatcagcgccgaggacggcgtcgac
tacgtcttcattcagtatgccgacgccatggccaagctcgctgtcgaccaggccgcacgc
atgctctacagatacaacctgcctcatgagaagaagagaccgcggaatttgagcaaactg
aatgatccttctacctgggagaagcggaggctcaaagggaagcttgctgttcagaagatg
gttgtcaacctgatggagttgtatttgcaaaggatgaggcagagcagacctccataccca
aagcctgtggcaatggaagagtttgctgctgaatttccttatgaacctactccagatcaa
tgccaggcttttatagatgttgagaaagatctgacagaaagggaaacaccaatggataga
ttaatctgtggagatgtgggctttggcaaaacggaagttgcaatgcgtgctatattcatt
gttatatctgcaggatatcaagctatggttctcgcgccaacgattatacttgccaagcaa
cactatgatgtaatgactgagcgttttgccaattatccggacataaaggttgccatattt
agtggtgctcagaccaaagatgaaaaagatgacctaataacaaagattaagaatggagat
ttgcacatcattgttggaactcatgctctccttacggaaaggatggcctatagcaatctt
ggtcttctagtggtggatgaagaacaaaaatttggtgtccagcaaaaggagaagattgca
tcatacaagtcttctattgatgttcttacactctctgcaacacccatcccacgtaccctg
tatctggctttgactggtttccgggatgcaagtttaatgtctacaccacctcctgaaaga
gtagcagtaaagacatatgtgtcagcatttagtaaagaaagggccctctcaactatcaag
tttgagctgcaacgtggcggtcaagtcttctatgttgtaccacgaataaaagcaatagac
gatgtgttgcagtttctcaaggactctttgccagatgtaccaatcgctgttgctcatgga
aagaaaatgtcaaagaacatacaatttgcaatggaaaagtttgcccgcggggaagtgaaa
attcttgtctgcacgcatattattgaaagtggaatagatgttgcaaacgcaaatacaata
attgtccagtttgcagaactatttggactcgcccagctgtatcagttacgaggaagagta
ggacgatcaggtagggaaggttttgcatacctcttctacacggataagtctttgctctca
agagttgcaacggatagacttggagctattgaggagcattcagagcttggccaaggtttt
catgttgcagagaaggatatgggtatcagggggtttggaagtttgtttggtgaccaacaa
tctggagatgttgcaaatgttggcattgatctattctttgatatgctttttgacagcttg
tcaaaggttgatcagttttgccttgtacctgttccttacaaagatgttcagctggatata
aacatttctcctcatctctcctctgaatatattagttacctggaaaatcctgtcgaattg
ctcaatgaagcagcaaaagctgcagagaaagatctatggaccttaatacagttcacagaa
gatcttcgtcgacgatatggaaaggagccccgtgatatggagttgctattgaaaaagctc
tatgtaaggcggatggcagcagatcttggtatcagtcgggtatatccatctggcaaaacg
atattcatgaaaacaaacatgaacaagaaggtatttaggctcatgacagaagcgatgact
tccgaaacacatcggaattccctatcgttcgtcggaaaagaaattaaggctgaactactc
gtcagtttaccagacactctacttctgaactggcttttccattgcttagcagactgctat
gctgtgataccagcccttgtgaagtactag
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