Setaria italica (foxtail millet): 101759446
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Entry
101759446 CDS
T02818
Name
(RefSeq) protein EXPORTIN 1A isoform X2
KO
K14290
exportin-1
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03008
Ribosome biogenesis in eukaryotes
sita03013
Nucleocytoplasmic transport
sita03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101759446
03008 Ribosome biogenesis in eukaryotes
101759446
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
101759446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sita03019
]
101759446
03009 Ribosome biogenesis [BR:
sita03009
]
101759446
03016 Transfer RNA biogenesis [BR:
sita03016
]
101759446
03036 Chromosome and associated proteins [BR:
sita03036
]
101759446
Messenger RNA biogenesis [BR:
sita03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
101759446
Ribosome biogenesis [BR:
sita03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
101759446
Pre-60S particles
101759446
Transfer RNA biogenesis [BR:
sita03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
101759446
Chromosome and associated proteins [BR:
sita03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
101759446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
101759446
NCBI-ProteinID:
XP_004980978
UniProt:
K4A569
LinkDB
All DBs
Position
IX:240645..250904
Genome browser
AA seq
1069 aa
AA seq
DB search
MAEKLRDLSQPIDVTLLDATVAAFYGTGSKEERSAADQILRDLQNNPDMWLQVVHILQNS
LNLNTKFFALQVLESVIKYRWNALPVEQRDGIKNYISDVIVQLSSNEVTFRQERLYVNKL
NIILVQVLKHEWPARWASFIPDLVAAAKSSETICENCMAILKLLSEEIFDFSRGEMTQQK
IKELKSSLNSEFRLIHELCLYVLSATQRSELIRATLATLHAFLSWIPVGFIFESPLLETL
LKFFPVAAYRNLTLQCLTEVAALQFGDFYNMQYVKMYTIFMMQLQAILPPETIPDAYANG
SSEEQAFIQNLALFFTSFFKNHMRILEITADNKTALHLGLEYLIGISYVDDTEVFKVCLD
YWNVFVLELFEAHNQMEPAAAVSMMGLQMVPGIVDGTGTAVQQRRQLYSGPLSKLRMLMI
CRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHEDTEQQMLKKLS
KQLNGEDWSWNNLNTLCWAIGSISGSMVEEQENRFLVMVIRDLLNLCEITKGKDNKAVIA
SNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHEMHPGVQDMACDTFLKIVQKCKRKFVT
QQVGENEPFVSELLSNLATTIADLEPHQIHTFYESVGHMIQAESDNAKRDEYLKRLMSLP
NQKWAEIIGQASQSIDILKNQDVIRSVLNILQTNTSVASSLGPHFFPQISLIFLDMLTVY
RMYSELVSSTIAEGGPFASRTSFVKLLRSVKRETLKLIETFVDKAEDLPHIGKQFVPPMM
DPVLGDYARNVPDARESEVLSLFATIINKYKGEMLEDVPRIFEAVFQCTLEMITKNFEDY
PEHRLKFFSLLRAIGTHCFQALIQLSSQQLKLVIDSINWAFRHTERNIAETGLSLLLEIL
KNFQASGFHNQFYKTYFLTIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCVVDGLTEPLWD
ATSVPYQYTDNAMFVRDYTIKLLGTSFPNMTATEVTKFVDGLLSSKHDLPSFKNHIRDFL
VQSKEFSAQDNKDLYAEEAAAQRERERQRMLAIPGLIAPSELQDDMVDS
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaagctcagggatctgagccagcctatagacgtgacgctgctcgacgccacc
gtcgccgccttctatggcaccggatctaaggaggagaggagtgctgctgatcagatactt
cgcgatctacaaaacaatccagacatgtggctgcaagtagtgcacattctgcagaattct
ctgaatttgaacaccaagttctttgccctgcaagtacttgaaagtgttatcaagtacaga
tggaacgcactgcctgttgaacaacgtgatggcataaagaattacatatccgatgttatt
gtgcagctttccagcaatgaagttaccttccgacaggagaggctttatgttaataaactc
aatattatattggtgcaggtcctaaaacacgagtggcctgccaggtgggcatccttcatc
cctgatcttgttgcagctgcaaagagtagtgaaacgatatgtgaaaattgtatggctata
ttaaagcttctaagcgaagaaatttttgacttctcaagaggtgaaatgacacaacaaaag
attaaagaactgaagtcttcgcttaatagtgagttccggctcattcatgagctatgcttg
tatgtcctatctgcaacacaaagatcagagctcatccgtgctacattggcgacactccat
gctttcttatcatggatccctgttggattcatctttgagtcgccattgctggaaacattg
ctgaagttcttccctgtggctgcttatcggaaccttacacttcaatgcctaacagaggtt
gctgctcttcagtttggtgatttttataacatgcagtatgtgaagatgtatacaattttc
atgatgcagttgcaggctattcttcctcctgaaacaataccagatgcctatgctaatggt
tccagcgaagaacaggcgtttatacaaaatctcgcactcttcttcacatctttttttaag
aatcacatgcgcatactggaaataactgcagataataaaactgctttacatctgggtctc
gagtaccttattggaatttcatatgttgatgatacagaggttttcaaggtctgcttggat
tactggaatgtgtttgtcttagagttatttgaagctcataatcaaatggaacctgcagca
gctgtaagcatgatgggacttcagatggttcctgggatagtagatgggacgggcacagca
gttcagcagaggagacaactttactctggtccactctcaaaactacggatgctgatgatt
tgccggatggcaaagcctgaggaagtattgattgttgaagatgaaaatggcaatattgta
cgtgagacaatgaaagacaatgatgttcttgttcagtataagatcatgagggaaacactg
atctatttgtctcatcttgaccatgaggatacagagcagcagatgttaaagaaattgagc
aagcaattaaatggtgaagattggagttggaataaccttaatactctatgttgggctatt
ggatcaatatcaggctctatggtagaggagcaggagaatagatttctggttatggttatt
cgcgatttgctaaacctctgtgaaatcaccaaggggaaagacaataaagctgtgattgca
agtaacatcatgtatgttgtcggtcagtatccaagatttctcagggctcattggaagttt
ttgaaaactgtggtcaacaaattgtttgagttcatgcacgagatgcaccctggagttcag
gatatggcatgtgataccttcctgaaaattgtccaaaaatgcaagcgcaaatttgtcaca
caacaggtgggcgagaatgaaccatttgtttctgaacttctgtccaaccttgctacaaca
attgccgatcttgagccgcatcagattcatacgttttacgaatcagttggccatatgatt
caagctgaatctgataatgctaagagggatgagtacctcaagagattgatgagcctccct
aatcagaaatgggcagaaataattggacaggcaagccaaagtattgatatcctgaagaac
caagatgttatcagatcagttctcaacatcttacagacaaacacaagtgttgccagctcc
ctcgggccacactttttcccacagatttcactaatattcttggacatgctaacagtctac
agaatgtacagcgagcttgtgtcaagcacaattgccgaaggagggccctttgcctcaagg
acatcatttgtaaaactcttgcgatctgtcaagagggaaaccctgaaattgatcgagact
tttgtggacaaggcagaagacttaccacacatagggaaacagtttgttcctccgatgatg
gatcctgtccttggtgattatgctagaaatgtacctgatgcaagggagtctgaagttctg
tcattgttcgcgacaatcattaacaagtacaaaggggaaatgcttgaggatgtgcctcgt
atatttgaggctgtttttcagtgcactcttgagatgattaccaagaattttgaagactat
cctgagcaccgcctcaaatttttttcattgcttcgtgcaattggcacccattgcttccaa
gcattgatccagctttcaagtcagcaattgaagcttgtgattgactcgattaattgggcg
ttcagacatacagagagaaatattgcagagactggccttagtctattgttggaaatattg
aagaattttcaggcttcaggattccataatcaattctacaaaacctattttttgacaatc
gagcaagagatttttgctgttctcacggacacattccacaaacctggtttcaagcttcat
gttttggtgctacaacacttgttttgtgtggtggatggtctaactgagcctctatgggat
gccacctcagtaccatatcaatatacggataatgctatgtttgttagagattacaccata
aaactcttggggacatcatttcctaacatgacggcaaccgaggtgaccaagtttgttgat
ggtcttcttagttcgaaacatgatcttccaagcttcaaaaatcatattagagacttcctg
gtgcagtcaaaggagttctcagctcaggataacaaggatctatatgccgaagaggctgca
gcccaaagagagagggagcgccaacggatgcttgccattccggggctcattgcccctagt
gaattgcaagatgacatggtagattcgtag
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integrated database retrieval system
