Setaria italica (foxtail millet): 101759595
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Entry
101759595 CDS
T02818
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sita04131
]
101759595
Membrane trafficking [BR:
sita04131
]
Protein recycling
Others
EARP complex
101759595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
TetR_C_30
EXOC6_Sec15_N
Motif
Other DBs
NCBI-GeneID:
101759595
NCBI-ProteinID:
XP_004983765
UniProt:
K4A560
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All DBs
Position
IX:complement(39470334..39481736)
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AA seq
1083 aa
AA seq
DB search
MRRDAPPPPTAHSASSSSLFGGGEQLFESGPSPLVFLPLLLIQGGGMDLSRVGEKLLSSV
RSARSLGLIPPIPAAPPPRPEVPERAAAAAAAARAIAGLPPHERINLPANSEDLVSIYGS
NPQGEPVEELEEVFYEEEFDPINYILQSIPEEGGDATYFDKQSTLRLAQLDKIAERLSHH
VMGHHEEMVKGMQLVMELEQDLKVANVICMNGRRHITSSKNELSRDLVVNVKSKKKQALL
DVLPILTELRHALDMQMELETFVEKDNYFQAFQLLPEYLQILENYSGLSAVQEMGRGIEA
WLARTIQKLDTHLLGVCQIFNEESYITVVDAYALMGDVSGMAEKMQSFFLQEVLSRTHYV
LKEMLEEEVGNNTQKNRFTYSDLCVQVPEPKLRPCLLKTLESLFSLMCSYYAIMSFSPGD
KNIESKGPHLADKNETSQNNDEALVDSGGGQSSAAVIQDGSAAERSDRASSSEVSNPDAS
TSGTDSPFYQLRTDATKLVAQTFQRGRRNLWQLATSRLSVLLSSSAVCSTSIYQFLKNYE
DLAIFILAGEAFCGFEASEFRQKLKTVCLNYVVSFHRQNVYALKMVLEKESWTIMSAEAS
QIISLAGLTGDGAALCSPTSRSSKLPINSYHANSTTANPGKQKLGFASWLKIENPFSFRL
ENGSAESPKSNMLFDSSVSNNHGNGNNSSLDEENEDLLADFIDEDSQLPSRIPKAKIVKG
NYSHWKDGDISSQTGSSLSLLRMMDKYARLMQKLEIVNVELFKGISQLFGIFYHYVYETF
GHQDRSQSGRHLPDHQSSRLKAALSKITQDSDQWTKPHNVSYSPSSPLSMSSTFGQMDVM
PTAPPSSMFTSYGLKERCAAAETVSLVARVLNRSKAHLHSVLSKNNTNAVEEFYRTLVDS
VPDLTEHIHRMSARMLLHIDGYPDKIANAKWEVKELGIEHNGYVDLLLGEFKHYKTRLDH
GGISKELQHLLMEYGIESIAEVLVEGLSRVKRCTDEGRALMSLDLQVLINGLQHIVSANV
RPKLQTVDTFIKAYYLPETEYVHWARSHPEYSKSQVVGLVNLVATMKGWKRKTRLETVEK
IEA
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgcgacgcgccgccgccacccaccgcccactcagcctcctcgtcatccctcttc
ggcggcggcgagcagctgttcgagtccgggcccagcccgctcgtcttcctgccccttctc
ctgatccagggcggcggcatggacctctcccgcgtcggcgagaagctcctcagctccgtc
cgctccgctcgctccctcggcctcatccccccgatccccgccgcgccccctccccgcccg
gaggttccagaacgagctgcggccgcggcagctgctgcacgtgcgatcgcggggttgcca
ccgcatgagaggatcaacctgccggccaattcggaggacttggtctccatctacgggagt
aacccacagggggagcccgtggaggagctcgaggaggtgttttatgaggaggagttcgat
ccaataaattacattctgcaaagtattccagaagaaggcggtgatgccacctattttgat
aagcagtctacattgagattagcgcagcttgacaagattgcagaacgattgtcacatcat
gttatgggccaccatgaagaaatggtgaaggggatgcagttagtgatggaactagaacaa
gacttaaaggttgcaaatgtaatatgcatgaatggacgaaggcatataacctcttcgaag
aatgagttgtcgagggatctggttgtcaatgtaaaatcaaagaagaaacaagctttgctg
gatgttcttcctattcttacagagcttcgtcatgcactagacatgcagatggaacttgaa
acttttgttgagaaagacaattactttcaggcgttccaattattgccagaatatttgcaa
attttggagaattattcaggcctttctgctgtacaagaaatgggacgtgggatcgaggca
tggttagctcggacaatccaaaagttggacacccatttacttggtgtttgtcagattttc
aatgaagaaagctacataactgttgttgatgcatatgcactgatgggtgatgttagtggc
atggctgaaaagatgcagagtttcttcttgcaggaagtactctctcggacacattatgtc
ctgaaagaaatgttggaagaggaggttggaaataatacacagaaaaataggtttacatat
agtgatctttgtgttcaagttcctgagcccaaacttcgcccctgcttgttgaaaaccctt
gagagcttattttcattgatgtgctcatattatgctattatgagcttttccccaggagat
aagaatattgagtccaagggcccgcatctagcagacaagaatgagacatctcagaataac
gatgaagctttagttgattcaggagggggtcagtcaagtgcagcagtcattcaggatggt
tctgcagctgaaagaagtgacagagcatcatcatccgaggtcagcaatcctgatgctagt
acatcaggaacggattctccattctatcagctgaggacagatgctacaaaacttgttgcg
caaacatttcaaagaggacgaagaaatctttggcagctggcaacaagtcgcttatctgtt
ttattatctagttcagctgtttgttcaactagcatataccaattcctgaagaactatgaa
gatcttgcaattttcattttggcgggtgaagcattttgtgggtttgaagctagtgagttc
cgccagaagttgaagactgtctgtttgaactacgtagtgtcctttcaccggcaaaatgta
tatgcacttaagatggtactggaaaaggaatcttggacaataatgtctgctgaagcgtcg
cagataattagtttagctggcctaactggtgacggtgctgcactgtgctctcctaccagt
agaagttccaagttgccaataaattcttaccatgcgaattcaactacagccaatccggga
aagcaaaagctcggattcgcttcttggcttaagatcgaaaatccattttcttttaggcta
gaaaatggctctgccgaatccccaaagtccaatatgcttttcgactcatcagttagcaat
aatcatggcaatgggaataattcatctctcgatgaagagaatgaagaccttctagcggat
ttcatcgatgaagatagtcagttgcctagtaggataccaaaagcaaaaattgtaaaaggc
aattattcacattggaaagatggagatatttcatcgcagacaggctcgtcactttctctg
ttaaggatgatggacaaatacgccaggctaatgcaaaagctggaaattgtcaatgttgag
ctttttaagggtatctcccaactgtttggcatcttttatcactacgtatatgagacattt
gggcaccaagacaggagtcaaagcggcaggcatttaccagatcatcaatcatctcggctt
aaagctgctttatcaaaaataacacaagactctgatcagtggacaaaaccacataatgtt
tcatattcaccttcatcccctttgtcaatgagttcaacttttggtcaaatggatgtgatg
cctactgcgcctcccagttcaatgttcacttcctatgggttaaaggagagatgtgcagct
gctgaaacagtatcgttggttgctcgagttttgaacagatctaaagcccatctgcactca
gtgttgtctaaaaataacactaatgctgttgaagagttctatagaacactggtggattct
gttccagatttgactgagcacattcacagaatgagtgcacggatgcttttgcatattgat
gggtatccagataagattgcaaatgctaaatgggaggtgaaggagcttggaatagagcac
aatggatatgttgatttgttattgggtgagttcaaacactacaaaacaagattagaccat
ggaggaatttctaaggagctccaacatctgttgatggagtacggtatagagagcatagca
gaagtcttggtggaaggtctctctagagtgaaacggtgcactgatgaagggcgtgcattg
atgtcgcttgacctgcaggtactaattaatgggttgcagcacattgtatcagcaaatgta
aggccgaagctgcaaactgtggacactttcataaaggcctactatttgccggagaccgag
tacgttcactgggcacggtctcatccagaatatagcaaaagtcaggtcgtcgggttggtt
aaccttgtggccaccatgaaaggatggaaacggaagacgagactagaaacagttgagaag
attgaggcgtag
DBGET
integrated database retrieval system
