Setaria italica (foxtail millet): 101759715
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Entry
101759715 CDS
T02818
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita00040
Pentose and glucuronate interconversions
sita01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101759715
Enzymes [BR:
sita01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
101759715
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Phage_cement
NosD
Motif
Other DBs
NCBI-GeneID:
101759715
NCBI-ProteinID:
XP_012700017
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Position
III:39250817..39252765
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AA seq
393 aa
AA seq
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MAFLIFFCFTASFLPLFISSPLPIHSSTTVSLIFLVLYRSVNTSRYRRMLDGDCGTGNPV
DDCWRCDPSWADNRQRLADCAVGFGRDAGGGKNGRNYVVTDPGDADDPSDPAPGTLRYGL
VQEGPLWITFARDMTIRPKHDLLVGSHKTVDGRGAAVVVGDGGACLVIHNASHVIVHGIT
VRGCKPARTASGGMSDGDGITVFRATDVWVDHCTLEKCTDGLIDVTDASTRVTLSNNLLR
NHDKAVLLGHSDDFTDDKDMKVTVAFNRFGPGLVQRMPRCRFGLFHVINNDYISWQIYAI
GGSASPTILSHGNRFLAGEAKEVTKRDGRTAESEWSTWTWISEGDMLLNGAFFRSSGSPG
PDVNTPSFAKSVSLVSAMTDSVGVLSCKEGSLC
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggcctttctcatcttcttctgctttactgcatcctttcttccccttttcatctcttct
ccattgccaatccactcctcaaccacagtgagtttaatcttccttgtcctttacagaagc
gtgaacacgtcacgataccgacggatgcttgacggcgactgcggcaccggcaacccggtg
gacgactgctggcgctgcgacccgagctgggccgacaaccggcagcgcctcgccgactgc
gccgtcgggttcggccgcgacgccggcggcggcaagaacggcaggaactacgtggtgacg
gacccgggcgacgccgacgacccgtcggacccggcgccgggcaccctccgctacggcctc
gtccaggaggggcccctgtggatcacgttcgcgcgcgacatgaccatccggcccaagcac
gacctgctcgtgggctcccacaagaccgtcgacggccgcggcgccgccgtcgtcgtcggg
gacggcggcgcctgcctcgtgatccacaacgcgagccacgtcatcgtccacgggatcacc
gtgcgcggctgcaagcccgcgcggacggcgagtggcggcatgtcggacggcgacggcatc
accgtcttccgcgccaccgacgtgtgggtcgaccactgcacgcttgagaagtgcaccgac
ggcctcatcgacgtcacggacgcatccacacgcgtgaccctgtccaataacctcctgagg
aaccatgacaaggcagtgcttcttgggcacagcgacgatttcactgatgacaaggacatg
aaggtcaccgttgcgtttaaccgtttcgggccaggtcttgtgcagagaatgccaaggtgt
cggttcggactctttcatgtcatcaacaatgactacataagctggcagatatacgccatt
ggtggcagtgcttcaccaacaattctgagccatggcaatcgattcctagcaggcgaggcc
aaagaggtgacgaagcgtgatggaagaacagcagagagtgagtggagtacctggacctgg
atatctgaaggtgatatgttgctcaacggcgcattcttcagatcatctggtagtcccggg
cctgacgttaacacccctagctttgccaaatcggtctccttagtgtcggcgatgactgac
tcggtaggggttctgtcatgcaaggaaggatctctgtgctga
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