Setaria italica (foxtail millet): 101759801
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Entry
101759801 CDS
T02818
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101759801
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sita03021
]
101759801
03036 Chromosome and associated proteins [BR:
sita03036
]
101759801
Transcription machinery [BR:
sita03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101759801
Chromosome and associated proteins [BR:
sita03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101759801
PBAF complex
101759801
GBAF(ncBAF) complex
101759801
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
YEATS
Motif
Other DBs
NCBI-GeneID:
101759801
NCBI-ProteinID:
XP_004975382
UniProt:
K3Y6E8
LinkDB
All DBs
Position
VII:17403541..17405658
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AA seq
534 aa
AA seq
DB search
MASGGNPNPTGAPPQPRPPHPQQQQPPGGSPATPMTHLRPPSLAGSPFQGLFRTPPSHNP
AFQIHMGASSSPQTPLMAAAAAAVAAQSAKRPPQKPPVRPPAPGSAAAASAAAAYKAAAA
AAAVANSGGVDLTPAARRNKKRKLPEKQLPDRVAALLPESALYTQLLEFEARVDAALARK
KVDIQEALKTPPSLQRTLRIYVFNTFANQRPLSNPLPQNADPPTWSLKIIGRVLEDGAEL
DPASVVPKHNPVYPKFSQFFKRVTIALDRSLYPENPVIVWENARSAAQQEGFEVKRKGDK
EFVANIRLEMNYNPEKFKLSQPLMEVLGVEVDTRARVIAALWQYIKAKKLQNPNDPSFFM
CDPQLKKVFGEDKLKFAMLSQKISQHLSAPPPINLEHKIKLSGNEASGSACYDVLVDIPF
PLQKEMMAFLANTEKHKDIEACDEVISTSIKKIHEHLRRRAFFLGFSQSPVEFINALIAS
QSKDLKLVAGEANRNVERERRADFYNQPWVEDAVIRYLNRKPASEGPGGGAGGS
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggcctccggcggcaaccccaacccgaccggcgccccgccccagccgcgcccgccgcat
ccccagcagcagcagccgccaggcggctctccggcgacgcccatgacccacctccgacct
ccctccctcgcgggctccccgttccagggtctcttccgcacgccgccctcccacaacccc
gccttccagatccacatgggcgcctcctcctctccccagaccccgctcatggctgccgcc
gccgccgccgtggcggcgcaatcggccaagcggcccccgcagaagccccccgtccggccc
ccggctcccgggtctgccgcggcggcttcggcggcagccgcgtacaaggcagcggccgcg
gcggcagcggtggcgaactccggtggcgtcgacctcacccccgccgcgcgacgcaacaag
aagcgcaagctccccgagaagcagctccccgaccgcgtcgccgcgctgctcccggagtcc
gcgctctacacgcagctgctcgaattcgaggcccgcgtggacgcggcgctggcgcggaag
aaggtggacatccaggaggcgctcaagacgccgccctcgctccagcgaacgctccgcatc
tacgtcttcaacaccttcgccaaccagaggccgctcagcaacccgctgccccagaacgcc
gacccgccgacctggtcgctcaagatcatcggccgcgtgctggaggacggcgccgagcta
gatcccgccagcgttgtgcccaagcacaacccggtgtatcccaagttctcccaattcttc
aagagggtgaccattgcgctggaccggtccctgtatcctgaaaatccagtgatcgtctgg
gaaaatgcgcggtctgccgcccagcaggaagggttcgaggtgaagaggaaaggggataag
gagtttgttgctaacatccggctggagatgaactacaacccagagaagttcaagctgtca
cagccgctgatggaggtgctcggggttgaggtggacactcgcgcgcgggtgattgctgcc
ctctggcagtacatcaaggcaaagaagcttcagaacccaaatgacccttccttcttcatg
tgcgaccctcaattgaagaaggtgtttggggaggataagctgaagtttgcaatgctgtcg
cagaagatatctcagcatctgtctgccccaccgcccatcaacttggagcacaagattaag
ctctcagggaatgaagcgtccggaagtgcttgctacgatgtgctggtggatatacccttc
ccgctgcagaaggagatgatggcattcctcgccaacacagagaagcacaaggacattgag
gcttgcgacgaggtgatatccacctcgattaagaagatccatgagcacctcaggaggaga
gcattcttcctgggtttcagtcagtcccctgtggagttcatcaacgccctgatagcttct
cagagcaaagatttgaagctggttgctggggaagcgaataggaacgttgagagggagaga
cgtgcagacttctacaaccaaccatgggtcgaggatgccgttataagatacttgaaccgt
aaaccagctagcgagggaccaggcggtggtgctggtggttcttga
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