Setaria italica (foxtail millet): 101759817
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Entry
101759817 CDS
T02818
Name
(RefSeq) mRNA-decapping enzyme-like protein isoform X1
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101759817
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sita03019
]
101759817
Messenger RNA biogenesis [BR:
sita03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101759817
mRNA degradation factors
5'-3' decay
Decapping complex
101759817
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
Motif
Other DBs
NCBI-GeneID:
101759817
NCBI-ProteinID:
XP_004977354
UniProt:
K3Y846
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Position
VII:complement(33944468..33948339)
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AA seq
372 aa
AA seq
DB search
MPPPPPPQANGGKVTPNLAMDAEATRMLNLTVLQRLDPAVEDILITAAHVTLYDFNIDLN
QWSRKDVEGSLFVVKRNLQPRFQFIVMNRRNTDNLVEDLLSDFEYELQPPYLLYRNAAQE
VNGIWFYNQHDCEAVASLFGRILNAYAKVPPKPKVPSTKSEFEELEAVPTSAAIDGPLEP
PPSSSALVSDAPDESLVNYFNGAATIGSVSSAQMAGRVHPSTEAVASAHVPLIVPSTAPA
HQIPHPLGGSSAPPLPLHDANAHVSHSANLLTPAFFAPPSPSSTSVAPAPPAASMMPTAP
PLHPTSASAQRPQYGTPLLQPFPPPTPPPSLTPAQNDGAVISRDKVKDALQRLVQSDEFI
DLIYRELQNAHM
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgccgccgccgccgcaggccaacggggggaaggtgaccccgaacctggccatg
gacgccgaggccacgcgcatgctcaacctcaccgtcctccagcgcctcgaccccgccgtc
gaggatatcctcatcaccgccgcgcacgtcacgctctacgacttcaacatcgacctcaat
cagtggagccgcaaggatgtggagggttcgctgttcgtcgtcaagaggaacttgcagccg
aggttccaattcattgtcatgaacaggcgcaacactgataatctggtggaggatctatta
agcgattttgaatatgaacttcagcccccatatttgttgtaccggaatgctgcacaagaa
gtaaatggcatttggttttataatcaacatgactgtgaagctgttgcaagcctttttgga
agaatactgaatgcttacgccaaagtgcctccaaaaccaaaagtgccctccacaaaaagt
gagtttgaggaattggaggctgttccaacatctgcagcaatagatggcccccttgaacct
ccgccatcatccagtgctctagtttctgatgcacctgatgaatcactggtgaattatttc
aatggtgctgctaccattggaagcgtatcaagcgcacaaatggctggaagagtgcatcca
tccactgaggctgttgcatctgctcatgtgccattgatcgttccatctactgctccggca
catcaaatacctcatcctttggggggttcatcagctccaccactccccctccatgatgca
aatgcccacgtcagccattcagcaaatcttttaacaccagctttctttgcacctccatca
ccctcttcaacatctgtagcacctgcaccaccggctgcatccatgatgcctacagcgccg
cctcttcatccaacttcagcatctgctcaacgtcctcaatatggcactcccttactccaa
ccttttcccccaccgactccacctccttcactgacccctgcacagaatgatggggctgtt
atttcaagggataaagttaaggacgccctccagagacttgttcagagtgacgagttcatc
gatttaatctatcgtgagttgcaaaatgcgcacatgtaa
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