Setaria italica (foxtail millet): 101759993
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Entry
101759993 CDS
T02818
Name
(RefSeq) chaperonin CPN60-2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101759993
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sita03019
]
101759993
03110 Chaperones and folding catalysts [BR:
sita03110
]
101759993
03029 Mitochondrial biogenesis [BR:
sita03029
]
101759993
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sita04147
]
101759993
Enzymes [BR:
sita01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
101759993
Messenger RNA biogenesis [BR:
sita03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
101759993
Chaperones and folding catalysts [BR:
sita03110
]
Heat shock proteins
HSP60 / Chaperonin
101759993
Mitochondrial biogenesis [BR:
sita03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
101759993
Exosome [BR:
sita04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
101759993
Exosomal proteins of other body fluids (saliva and urine)
101759993
Exosomal proteins of breast cancer cells
101759993
Exosomal proteins of colorectal cancer cells
101759993
Exosomal proteins of bladder cancer cells
101759993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
101759993
NCBI-ProteinID:
XP_004982955
UniProt:
K4A7N1
LinkDB
All DBs
Position
IX:complement(17442715..17447810)
Genome browser
AA seq
576 aa
AA seq
DB search
MYRAAASLASKARQAGSSAAARQVGSRLAWSRNYAAKDIKFGVEARALMLRGVEELADAV
KVTMGPKGRNVVIEQSFGAPKVTKDGVTVAKSIEFKDRVKNVGASLVKQVANATNDTAGD
GTTCATVLTKAIFTEGCKSVAAGMNAMDLRRGISMAVDAVVTNLKGMARMISTSEEIAQV
GTISANGEREIGELIAKAMEKVGKEGVITIADGNTLYNELEVVEGMKLDRGYISPYFITN
SKTQKCELEDPLILIHDKKVSNMHAVVKVLEMALKKQKPLLIVAEDVESEALGTLILNKL
RAGIKVCAVKAPGFGENRKANLQDLAVLTGGEVITEELGMKLESVEPLMLGSCKKVTVSK
DDTVILDGAGDKKAIEERAEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEA
EVGEKKDRVTDALNATKAAVEEGIVPGGGVALLYAAKELDKLQTANFDQKIGVQIIQNAL
KTPVHTIASNAGVEGAVVVGKLLEQGNTDLGYDAAKGEYVDMVKAGIIDPLKVIRTALVD
AASVSSLMTTTESIIVEIPKEEAPAPAMGGMGGMEY
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgcgcagcagccagcctcgcctccaaggcgcggcaagccgggagcagcgccgcc
gctcgccaggttgggagcaggcttgcctggagcagaaactatgctgccaaggatatcaag
tttggcgttgaggcccgtgccctgatgctgaggggcgttgaggaattggctgatgcagtc
aaagtgacaatgggtcctaagggtcgcaatgtggttattgaacaaagctttggtgcacca
aaagtcacaaaagatggtgtgaccgttgctaagagcattgaattcaaagatagagtaaag
aatgttggtgcaagccttgtgaagcaggtcgccaatgcaactaacgacactgctggagat
ggtaccacatgtgctactgttttgacaaaagcaatatttactgaggggtgcaaatctgtt
gcggccggaatgaatgcaatggatttaaggcgtggaatctcaatggctgttgatgctgtt
gtgaccaatctgaagggcatggccagaatgatcagcacgtcggaagagattgcacaggtg
ggtacaatatcagcaaatggggaaagggaaattggtgaacttattgccaaggctatggag
aaggttggcaaagagggtgtgatcaccattgcggatggtaacaccctttacaatgagctt
gaagttgtggaaggcatgaaacttgacagaggttacatctccccgtacttcattaccaac
tcaaaaacccagaaatgtgaactggaagaccctttgatcttgattcatgacaagaaggtc
tcgaacatgcacgcggtggttaaagttttggagatggctctaaagaagcaaaagcctcta
ctgattgttgcagaagatgtggaaagtgaagcattgggcactctgattcttaacaagctt
cgtgcaggcatcaaggtctgtgctgttaaagctcctggttttggggaaaacaggaaggca
aacttacaagaccttgctgtccttaccggaggagaagtcataactgaagagcttggaatg
aaacttgagagtgttgaacctctaatgttgggttcatgcaaaaaggtgactgtctctaag
gatgacactgttattcttgatggagctggagacaagaaggccattgaagagagggcagag
cagattagatctgcaattgagaatagcacatctgattatgacaaggaaaagctacaggag
aggttggcaaagctctctggaggtgttgctgttctaaagattggaggagccagcgaagca
gaagttggtgagaagaaggatagagtgacagatgcactgaacgctactaaagctgctgtg
gaagagggcattgtaccaggtggtggtgttgctcttctctatgcggcaaaggagcttgac
aaattgcagaccgcgaactttgatcagaagattggtgtccagatcattcagaacgccctg
aagacacctgtgcacaccattgcttccaatgctggtgtggagggagcagtggtggtgggc
aagcttttggagcaaggaaatactgaccttggttatgatgctgccaaaggtgaatatgtt
gacatggtgaaggccggtatcatcgatccactaaaagtcatcagaactgccttggtggat
gctgctagcgtgtcatccctgatgaccacaacggaatccatcattgtagagatccccaag
gaagaggcacccgcaccggcaatgggtggcatgggtggaatggagtactag
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