KEGG   Setaria italica (foxtail millet): 101760030
Entry
101760030         CDS       T02818                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog 1
  KO
K12184  ESCRT-I complex subunit VPS28
Organism
sita  Setaria italica (foxtail millet)
Pathway
sita04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:sita00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    101760030
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sita04131]
    101760030
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sita04147]
    101760030
Membrane trafficking [BR:sita04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    101760030
Exosome [BR:sita04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   101760030
  Exosomal proteins of other body fluids (saliva and urine)
   101760030
  Exosomal proteins of colorectal cancer cells
   101760030
  Exosomal proteins of bladder cancer cells
   101760030
SSDB
Motif
Pfam: VPS28 Thrombin_light RSLD_CPSF6
Other DBs
NCBI-GeneID: 101760030
NCBI-ProteinID: XP_004970187
LinkDB
Position
V:38653184..38654307
AA seq 212 aa
MEVKLWNDKRERELLESYADLYAIIKATEKLERAYVRDLVSAADYEAECLKLISQFNSLS
SSLAGAVTVPRFVQAYRLDCPAALNRLLQSGVPATVELRAASSSSAPAATAASAASIAHC
VQTFITAMDAVKLNMLANDQVRPLLQDVSTSMARLGPLLPPDFEGKVKVNEWLSKLHKMG
AADELTEQQARQLNFDLDSAYSAFLAALPAGM
NT seq 639 nt   +upstreamnt  +downstreamnt
atggaggtgaagctgtggaacgacaagcgggagcgggagctcctggagagctacgcggac
ctgtacgcgatcatcaaggcgacggagaagctggagcgggcctacgtccgcgacctcgtc
tccgccgccgactacgaggcggagtgcctcaagctcatctcccagttcaactccctctcc
tcctcgctcgccggcgccgtcaccgtcccgcgcttcgtccaggcgtaccgcctcgactgc
cccgccgcgctcaaccgcctcctccagtcgggcgtcccggccaccgtcgagctccgcgcc
gcatcgtcgtcctcggcgccggccgccaccgccgcatccgccgcctccatcgcgcactgc
gtccagaccttcatcaccgccatggacgccgtcaagctcaacatgctcgccaacgaccag
gtccgcccgctgctgcaggacgtctccacctccatggccaggctcggccccctgctgccg
cccgacttcgaggggaaggtcaaggtgaacgagtggctcagcaagctgcataaaatgggc
gccgcggatgagctcaccgagcagcaggctaggcagctcaacttcgacctcgactcggcg
tacagtgccttcttggctgcgctgcctgctggcatgtga

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