Setaria italica (foxtail millet): 101760161
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Entry
101760161 CDS
T02818
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3 isoform X1
KO
K14829
pre-rRNA-processing protein IPI3
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sita03009
]
101760161
Ribosome biogenesis [BR:
sita03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
101760161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_IP5PC_F
Beta-prop_DCAF4
Beta-prop_LRRK2
Beta-prop_Vps41
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_DCAF12
Beta-prop_HPS5
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_KIB1-4
Beta-prop_VPS8
WDR54
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
101760161
NCBI-ProteinID:
XP_004968583
UniProt:
K3XI32
LinkDB
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Position
V:12951702..12956584
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AA seq
426 aa
AA seq
DB search
MAPPPPKQLVLAASSADAGVAAWDLRTGAEEIRHRPCASRPRALASVAGRFLAAAQAPPS
GGNSGTVHFYHWDKPQVAVKSFPAEPIRALLADQEGSYLIGGGSNGNLFLWEVASGELLH
TWHAHYRAVRCLALYDYLLVSGSEDGSIKVWDLITVLDEQSRLEAQTPYLYSFNQHALPV
TDIACFLGAIAVSSSEDRTCKIWSLSKGRMLRSIQFPTSIDSVALDPRSHVFYAGGRDGK
IYVTAMGVDISSHGSDESSILGALDDHSKAVTSLVSSTDGLLLVSGSEDGNVRVWDTRSQ
QVTRKFKHSQGPVTNVLIVTPKRVNLPPLHPLHKVCSANGEVEPRSVILPRPENDVPIPG
NRTSIFMERYLDELQKYGGSSMLFDSGLNIQNGAQNQQGEWRSRYLELQDLFVHEVLDQM
PSSRNP
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgccgccgccaaaacagcttgtactggccgcatcctccgccgacgccggcgtg
gccgcctgggacctccgcaccggcgcggaggaaatccgccaccggccctgcgcctcccgt
cctcgcgcgctcgcctcggtcgccggccgcttcctcgccgccgcccaggcccctccgtct
ggcggcaactccggcaccgtccacttctaccactgggacaagccgcaggtggccgtcaaa
agcttccccgctgagccgatacgcgcgcttcttgcggaccaggaggggagctacctcatc
ggcggtggcagcaatggcaacttgttcctttgggaggtggccagtggagagcttctccac
acatggcatgcacactatcgtgctgttaggtgccttgcactttatgactatctgcttgtc
tcaggatcagaagatggtagcatcaaagtttgggatttgatcacggtgcttgatgagcag
tcaaggttggaagcccagacaccatatctctacagtttcaatcagcatgcgctgcccgta
actgatattgcttgtttccttggagcaattgctgtatcttcttcagaagatcgaacatgc
aaaatttggagtttatcaaagggtaggatgctaagaagcattcagtttcccactagtatt
gattctgtagcactagacccaagaagtcatgttttctatgctggtggtagagatgggaaa
atatatgttactgctatgggtgttgatatcagttctcatggtagtgatgagtcctctatt
cttggtgctttggatgaccacagcaaggcagtaacaagcctggtatcaagcacagatgga
cttctactagtgtctggatctgaggatggtaatgttcgggtgtgggatactagaagtcag
caagtaacccgaaaattcaaacactcccaaggtccggtaaccaatgttttgatagtaacg
ccaaaacgagtaaatctgccaccactacacccattacataaagtttgctcagcaaatggg
gaagttgaaccacggtctgtaattctgcctcggcctgaaaatgacgttcctattcctgga
aatcgaacctccatttttatggagcgttacttggatgaacttcagaagtatggtggttct
tccatgttatttgattctgggctgaacattcagaatggcgcacaaaaccaacagggtgaa
tggagaagtagatacttggagttgcaggatctctttgtgcatgaggtcctcgaccagatg
ccatcctcgaggaatccatga
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