Setaria italica (foxtail millet): 101760232
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Entry
101760232 CDS
T02818
Name
(RefSeq) nuclear poly(A) polymerase 1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101760232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sita03019
]
101760232
Enzymes [BR:
sita01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
101760232
Messenger RNA biogenesis [BR:
sita03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
101760232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Motif
Other DBs
NCBI-GeneID:
101760232
NCBI-ProteinID:
XP_004958551
UniProt:
K3ZR08
LinkDB
All DBs
Position
II:complement(47278853..47285684)
Genome browser
AA seq
747 aa
AA seq
DB search
MSKAKNSNGYLGVTEPISLSGPTEKDLVQTAEVEKYLSSAGLYESQEEAVSREEVLGKLD
QTVKAWIKKATRISGYGEQFVHEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRNEY
FFRWLHEMLAEMPEVTELHPVPDAHVPVLGFKINGVSIDLLYANLAHAVIPEDLDLSQDS
ILYNVDEQTVRSLNGCRVTDQILKLVPNIPSFRTTLRFIRYWGKRRGVYSNVMGFLGGIN
WAILVGRICQLYPNASPSMLISRFFRVYSKWKWPNPVMLCHIEEGPLGLAVWDPRRNYRD
RGHQMPIITPAYPCMNSSYNVSVSTRYVMIQEFTRAFEICQAIDEGKADWDALFEPFPFF
ESYKNYLEVNITARNEDDLRNWKGWVESRLRTLVLKIERYSHETILAHPYPRDFSDKSRP
LHCFYFMGLWRKQTVQAQEAEQFDIRGIVNEFKSNICAYQHWKEGMDIEVSHVKRREIPL
FVFPGGVRPSRSSRTAHKNSRTVPACDVSAGQVENVLCTVSCSDAQPIPYKGSYTKQPEP
DNGCLQLLGSTSVLPSSLPNKEALNGHANFHAESVEREHPEHYQESTFAPVQNNVCHAVK
QHNILLPNSNNGWQSYGPGSSLNSSQRECADSAANNLPSLPPAIPAEPDELDELVSYHQV
KANQVDINADQRPSLEGSSEDNLEQPCSLRPQNSNNPKRKATEELEPLELAAPSVGAAPA
SASTAPRKPLRLRLTTLAKPKPAEGSS
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaggcgaagaacagcaatggttatcttggcgtcaccgagccgatctcgcttagt
gggccgacagagaaggatcttgtgcagacagctgaggtcgaaaagtacctttcaagcgca
ggcctgtatgagagccaagaggaggctgtctcgcgagaagaggttttaggcaagctggac
cagactgtgaaggcttggatcaagaaggctaccaggatcagtgggtacggagagcaattt
gtgcatgaagcaaatgcaaagatctttacatttggttcataccgtcttggggtacatggt
cctggcgcagacattgatacactatgtgttggtccaagacatgcaactcgaaatgagtac
ttcttcaggtggcttcacgaaatgctcgctgagatgccagaagttacggagttacatcca
gtaccagatgctcatgtgcctgttctgggattcaaaattaatggggtctctattgacctt
ctgtatgctaaccttgctcatgcagtgattcctgaggacctagatctttctcaggactca
atattgtataatgttgatgaacagactgttcgtagtctaaatgggtgtcgggttactgat
caaattttaaaattggttccaaacattccgagttttcgcacaaccttaagattcataaga
tattggggaaagcgtcgcggggtttactcaaacgttatgggatttctgggtggtataaac
tgggcaattcttgtcggtcgaatctgtcaactgtacccaaatgcatcccctagcatgttg
atatctcgttttttccgtgtctacagcaagtggaagtggcctaatcctgttatgctttgc
catattgaggagggtcctcttggtctcgctgtgtgggatccaagaagaaattacagagac
aggggccatcaaatgcctattattacacctgcttacccttgcatgaattctagctataat
gtatctgttagtactaggtatgtgatgatccaagaattcacacgagcatttgagatttgc
caggccattgatgaaggaaaagcagactgggatgcattgttcgagccatttccatttttt
gaatcatataaaaattatctagaagttaatatcacagcgagaaatgaagatgacctcagg
aattggaaaggttgggtggaatctcgccttcgcactcttgtattaaagattgaacgatat
tcacatgagacgatccttgcacatccgtatcccagagatttctcagacaaatcaaggcca
ctacattgcttttacttcatgggtctttggagaaaacaaacagtgcaagctcaagaagct
gagcaattcgacatcaggggaattgtaaatgagttcaaaagcaatatttgtgcatatcaa
cactggaaagagggaatggacattgaagtgtcccatgtaaaaagaagagaaattcctttg
tttgtttttcctggtggagtgcgtccttctcgttcttctagaacagcacacaagaacagt
cgtactgttccagcttgtgacgtttcagctggtcaggtagaaaatgtattgtgcacagtc
agttgtagtgatgctcaacctataccatataaaggcagctatacaaaacaaccagaacca
gataatggctgccttcagttgctgggaagtacttctgtgttgccctctagtttacccaat
aaagaagctttgaatggccatgctaattttcatgcagaatctgttgagcgtgaacatcca
gaacactatcaggaaagtacatttgctcctgtgcaaaataatgtgtgccatgcagtcaag
caacataacattttgctgcctaattccaacaatggttggcaatcatatgggcctggttcc
tctcttaacagttcacaaagagaatgtgcagacagtgctgcaaacaacttgcccagtttg
ccacctgctattccagctgaacctgatgaacttgatgagctggtgtcctatcatcaagtt
aaagctaatcaggtagatataaatgctgatcagaggccatctttggagggctcttctgaa
gataacctggaacaaccatgttctctgaggccccaaaattctaataatccgaagcgcaaa
gccactgaagagcttgagccacttgagcttgctgcgccatcagttggagctgctcctgcg
tcggcatcaactgccccaagaaaaccacttagattgaggttgacgactttagccaaacca
aagccagcagaaggaagttcctga
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