KEGG   Setaria italica (foxtail millet): 101760317
Entry
101760317         CDS       T02818                                 
Name
(RefSeq) small nuclear ribonucleoprotein SmD3b
  KO
K11088  small nuclear ribonucleoprotein D3
Organism
sita  Setaria italica (foxtail millet)
Pathway
sita03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sita00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101760317
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sita03019]
    101760317
   03041 Spliceosome [BR:sita03041]
    101760317
   03032 DNA replication proteins [BR:sita03032]
    101760317
Messenger RNA biogenesis [BR:sita03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     101760317
Spliceosome [BR:sita03041]
 Complex A
  U1 snRNP components
   Sm proteins
    101760317
  U2 snRNP components
    101760317
 Complex B
  U1 snRNP components
    101760317
  U4/U6.U5 tri-snRNP components
    101760317
 Complex C
  U2 snRNP components
    101760317
DNA replication proteins [BR:sita03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     101760317
SSDB
Motif
Pfam: LSM SM-ATX DUF6897
Other DBs
NCBI-GeneID: 101760317
NCBI-ProteinID: XP_004951184
UniProt: K3YWN5
LinkDB
Position
I:complement(163959..166006)
AA seq 132 aa
MSRSLGIPVKLLHEAAGHVVTVELKTGEVYRGAMVECEDNWNCQLDNITFTAKDGKVSQL
EHVFIRGSRVRFMIIPDMLKNAPMFKRLEARIRGKGSAVGVGRGRAVAMRARAAAGRGGG
PVGRGGAPPVRR
NT seq 399 nt   +upstreamnt  +downstreamnt
atgagccgcagcctcgggatcccggtgaagctgcttcacgaggcggcgggccacgtcgtc
acggtcgagctcaagaccggcgaggtctaccgcggcgccatggtcgagtgcgaggacaac
tggaactgccagctcgacaacatcaccttcacggcaaaggacggcaaggtgtcgcagctg
gagcacgtcttcatcagggggagcagggtcaggttcatgatcatacccgacatgctcaag
aacgcccccatgttcaagcgcctcgaggccaggattaggggtaaaggctcagctgttggt
gttggccgtggccgcgcggtcgccatgcgtgctcgggctgctgctggtcgtggtggtggt
cctgtaggacggggtggcgcaccccctgtgaggaggtag

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