Setaria italica (foxtail millet): 101760483
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Entry
101760483 CDS
T02818
Name
(RefSeq) nuclear pore complex protein NUP214
KO
K14317
nuclear pore complex protein Nup214
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101760483
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sita03019
]
101760483
Messenger RNA biogenesis [BR:
sita03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101760483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TACC_C
GIT_CC
Motif
Other DBs
NCBI-GeneID:
101760483
NCBI-ProteinID:
XP_004958728
UniProt:
K3ZPX1
LinkDB
All DBs
Position
II:complement(48684281..48695116)
Genome browser
AA seq
1766 aa
AA seq
DB search
MGSPRELDLSDEVEGDQDGTTDFVFRLAGDPIPLLPTDSSPLPLFDLQSPPARPLAVSDR
HATVFLAHPNGFMAVRTKELIEASKEAREKGKASTRCVQDCCVADVPLPGVSLLALSHDD
SVLAACTDTEIHFFSLASLLTHKDVVPSSSCSMGRAGTVKDFKWLNRASAAYVVLSNGGL
LCHGTLGEGLKDVMENVDAVDCCKEGNHIAVAREKKLTILSSDFKETCCMPLLFQLWSDE
SDSEGSTIKVDSIGWIRDDSIVIGCVRLNEDDNEEGYLVQVIRSEENTFCESPGKPVVYT
YVDFFNGVMDDVLPSGVGPNLLLGYLRRWDLMVASNKKSIDEHIALLKWPSTHDDEKTVK
CLEMLEDKYSPRIDLQENGDDNVILGFGVENVSLFQKITVTVGPEQKEVAPQHILLCLTG
EGKLILYYLARISDPSDLPHTALSTNEDFCEKQISPAAVSKEELTPSVTGSVSKSILREH
GAEPSSAQTGSNQQESMDVRNSSSVSKKQETTGNSLLISSDKKPLDTKQVNVTAPLATAP
SLALTGNTKPAETFSFSTVNNEGTNPTGSKAPSGLAPSLQQSSNSFGNNQSGKGGLDSIQ
SVGTFGGSQNSNKDGAGFGFKSSLFASSGSVPAKIGERSEAGFGNTSPQTSYTADRKVFG
PPVALSSGPLPSISPAKPSLIGSSSSGYRTGNSEAPQSLHGSPPSQQTIGKSHNSRTQAP
VDYSRNSNMGTIFDSQEDLSKKLYSINEMTKELDALLAYIEKDGGFRDACITFQQRPLSV
FEDGLQNFMELLQVFKNKVEGQCSKIEDLRNKMFQVSARQAYMKGIVSQSSDTQYWDIWN
RQKLSPEFEVKRQNILKANQNLTNQLVELERHFNNLEMNRSSETGRLASSRRAVYSNKSR
ASQTQLSSVCNALNSQLAAAEQLSECLSKQISVLNIGSPTTKRGAVTKELFESIGLAHTT
DATKFLGSTPSKSIKRFPSVNEHSKGVLGPSKSAEPETARRRRESLDMSLASLEPQKTTV
KRIAQQQRLKISSDLPFRSNKKIFDSQMAAISQEKPSDSSNSSIVESYASRLRSPSEDVT
AKSSGSQQNPLFKWVKESAGPTQSSEQKHFELPGQMKSTAQSSKLAPSSPAFSYTHKGAQ
DSISPSNVSSFGTTHIVPKSNTLTFKTTITPKSNANTEPNIPSMATAKTPQSPLSVKTLT
GESGDLSTLAMKNRQDNQAMPSLGNTKGSGPPQSKGDIFRDLSKSSFTSEHSKPAVLHEK
TGQLSRISDAVQNTVKDTPKVASQPPAFSPTPVTQTNSYSIKPTVSSSATSASSGMQASA
AKTSDILSSSMQKSTPKVSPLVPEDNVSSSLQSIPTPVKDLSTGLGKNAAKPETLTSEVT
RTIVPASMASVISTTESKPSSPPTTGANLPSTPVPAPKTAPTTAESVVTSTGKDVGPNNN
STDEDDMEEEAPSASAELNLGALGGFGLGSQPSSSPQKSNPFGTSFGTSENKSSGTPFAL
TTSPGQLFRPASLSIPSAQPAQPSQSTSSSAFSSTFSSGFTGFGQPAQLGSVHQAGFGQP
AQIQSGFGQPAQIVSGPQSGFGQPAQIGVGQQSGFGQPAQFGAQQALGSVLGSFGQSRQL
GGVGSGGFGGFASAATPGGFGSLSSSNAGFAGAAAGGGFSAPAASAGGGFAAAATGGGFA
ALASKSGGFAAAASSGGGFAAAVPSGGGFAAAASSGGGFGGATQGGGFGSGGGFGSFGGN
QGAGFSAFGASGPGRPPADLLTQMRK
NT seq
5301 nt
NT seq
+upstream
nt +downstream
nt
atgggctcgccgcgcgagctggacctctccgacgaggtcgagggcgaccaggacggcacc
accgacttcgtcttccgcctcgccggcgaccccatcccgctcctcccgaccgactcctcc
ccgctcccgctcttcgacctccagtcccctcccgcgcgcccgctcgccgtctccgaccgc
cacgctaccgtcttcctcgcccaccccaacgggtttatggctgtgaggacgaaggagttg
atcgaagccagtaaggaggcgcgggagaaaggcaaggcgagcacccgctgcgtgcaggac
tgctgcgtcgccgacgtgcctctccccggcgtctccctcctcgcgctatcccatgacgat
tccgtgcttgccgcctgcacggacactgagatccacttcttctccttggcgtctctgctc
actcataaggatgttgtaccatcctcatcatgcagcatgggacgagctggcaccgtgaaa
gattttaagtggttaaatcgtgcctctgcagcatacgttgtactatcgaatggtgggctg
ctgtgtcatgggactttgggcgaaggtctgaaggatgtaatggaaaatgttgatgcagtt
gactgttgcaaggaaggaaatcatattgctgttgcaagagagaaaaaacttaccatatta
tcatcagattttaaggaaacatgttgcatgcccctcttgttccagttgtggtctgatgaa
agtgattcagagggcagtaccatcaaagtggattccattggctggatacgtgatgatagt
attgttatcggttgtgttcgattaaatgaagatgacaatgaggaaggctatcttgttcag
gttataagaagtgaagaaaacacattttgtgagagcccaggcaagccagttgtatatacc
tatgtggattttttcaacggcgtcatggatgatgttttaccatctggagttggacctaat
ctgctattgggttatctgcgtcgctgggatctcatggtggcttctaataaaaagagcatt
gatgaacacattgcccttctgaagtggccgtccacccacgatgatgaaaaaactgtaaaa
tgtcttgaaatgttggaggataaatacagtcctaggatcgatttgcaagagaatggtgat
gacaatgtcatactagggtttggtgttgagaatgtttcgctatttcaaaagatcactgtt
acagttggacctgaacaaaaggaggttgcccctcaacatattctactctgtttgactggt
gaaggcaaactaattctatattatctcgccaggatttcggacccttctgatttacctcat
actgctctgtctaccaatgaggacttttgtgaaaaacagatttcacctgcagctgtatct
aaagaggagttgactccaagtgttacaggctcggtatctaagagtattcttagagaacat
ggtgctgagccctctagtgcacaaacaggtagcaaccaacaggaatcaatggatgtcaga
aacagttcctcagtttcaaaaaaacaggaaacaactggcaattcgttgcttatctcttct
gataagaagccattagacaccaagcaagtgaatgtgactgccccactcgcaacagcacca
agtttagcactgacaggaaacacaaaacctgcagaaactttcagcttttctactgtcaat
aacgaaggcacgaatccaacaggaagcaaggcacctagtggattagctccttccttgcaa
caaagcagcaacagttttggaaacaaccaaagtggtaaaggaggcctggattcaatccaa
tcagtgggaacatttggtggatctcaaaactccaataaggatggtgctggctttggtttc
aaatcatcattgttcgcctctagtggatctgtccctgccaagatcggagaaaggagtgaa
gctggttttggaaatacttcgccgcaaaccagctacactgctgataggaaagtatttggt
cctccagttgccttaagttctggacctttaccatccatatctccagctaaaccttcccta
attggatcttcatcaagtgggtatcggacaggaaactctgaagcacctcaatcattgcat
ggatcacctccgtcacagcaaactataggcaaatcacataacagcaggacgcaagcacca
gtagactattctagaaactccaatatgggcacaatattcgattctcaagaagacttgtct
aagaagttgtacagtataaatgaaatgacaaaggaattagatgccctactagcatacata
gaaaaagatggtggtttcagagatgcttgcataaccttccagcagcgtcctctttctgtg
tttgaggatggtttgcaaaactttatggagttgttgcaggtctttaagaataaagtagag
ggacaatgttcaaaaattgaagatctgaggaacaagatgtttcaagtttctgctaggcaa
gcttacatgaaaggaattgtcagccagtcttcagatactcagtactgggacatatggaac
cgtcagaaattgagtccagaattcgaagtaaagaggcaaaatattctcaaagctaaccag
aatttgacaaatcagctggtcgagctagagaggcacttcaataatctggagatgaacaga
tccagtgaaacaggaagattggcttctagtcgtagagctgtttattccaataagtcaagg
gcgagtcaaacacaattatctagtgtgtgcaatgcactgaactcacaattggcagcagct
gagcaactatctgaatgcctctcaaaacagatatctgtgttaaatataggttctcctact
acgaagcgaggggcagtgaccaaagagttgtttgaatcaattggtttagcccacacaact
gacgcaaccaaatttttaggcagcactccttctaagtccattaagcggtttccatcagtg
aatgagcattcaaagggagtattagggccttccaagagtgctgaacctgagactgcacga
aggaggagagaatcactggatatgagcctggctagtttggaacctcagaaaactactgtt
aaaagaatagcacaacaacaacgcctcaagatcagcagtgatctgccattcagatcaaac
aagaaaatatttgattctcaaatggcagctatatcgcaggaaaagccaagcgatagctcc
aactcctctatagtagaatcatatgcaagcagactgcgttctcctagtgaagatgtaaca
gcaaaatcatcaggatcccaacaaaacccgttgttcaaatgggtcaaggaatcagctggg
ccaactcaaagctcagagcaaaagcattttgagttaccagggcaaatgaaaagcactgct
caatcttcaaaattggcaccatcttcaccggcattcagttacacacataagggtgcacaa
gatagtatcagtccatccaatgtttcatcttttggaacgacacatattgtgcctaagtca
aatactttaaccttcaaaaccactataacccctaaaagtaatgccaacacggagccaaat
ataccttccatggcaacagcaaaaactcctcagagtccactgtctgtgaaaactctaact
ggggagtctggagatttgtctacattagctatgaagaacagacaggataatcaggcaatg
ccatctttggggaacactaaaggatcgggtcctccacagagcaagggtgacatatttaga
gatcttagcaaatcatcttttacttctgaacattccaagcctgctgtattacatgagaag
actggtcagcttagcaggattagtgatgctgtgcagaacactgtgaaagatacacccaag
gtggcatctcaacctcctgcgttctctccaacacctgttacacaaaccaattcatattcc
ataaagccaactgtttcctcttcagctacatcagcctcgtcaggtatgcaagcatcagct
gcaaagacttcggatattttgtctagctcaatgcagaaatcaacgccaaaagtttctcca
ttagtacctgaggataatgtgtctagctccctacaatccatcccaacacctgttaaggat
ttgtcaactggcttgggtaaaaatgcagccaaacctgaaacacttacatcagaggtaact
agaaccatagttcctgcaagtatggcttcagtcatatcgaccactgaaagcaagccttca
tcgcctccaacaactggtgccaacttgccttctactccagtccctgctcctaaaacagca
cctacaacagcagaatctgttgtcacttctacaggaaaagatgtcggaccaaacaacaac
tcaaccgatgaagatgatatggaagaggaggcgccttctgcaagtgccgaactcaatttg
ggagcccttggtgggtttggactcgggtctcagccttcttcaagtcctcaaaagtcgaat
ccttttgggacctcctttggtacatctgaaaataaaagttctggcacgccatttgctttg
acaaccagtccagggcagcttttccggccagcatcgctaagcattccttcagcccagcca
gcccagccatctcagtcaactagctctagtgccttttctagtacgttctcaagtgggttt
actggatttggacagcctgcacaacttggatctgttcatcaggcaggatttgggcagcca
gcacaaattcagtccggttttggtcagccagcacaaattgtatctgggccgcagtcagga
tttgggcagcctgcacaaattggggttggccagcagtcagggtttgggcaacctgcacag
tttggtgctcaacaggcgcttgggtcagtgctgggttcttttggacaatcgcgccagcta
ggaggcgtaggttctggaggatttggtggatttgctagtgctgctacacccgggggcttt
ggttctttatcttcaagcaatgctggatttgctggtgctgcagcaggtgggggcttttcg
gcacctgctgcttctgcaggtggcggttttgctgctgctgctactggtggaggttttgct
gctcttgcctccaaaagtggcggtttcgctgctgcagcttcatctggtggcggtttcgct
gctgcagttccatctggtggtggttttgctgctgcagcttcatctggtggtggctttgga
ggtgccacgcagggcggtggctttggcagtggtggtggattcgggtcctttggtggtaat
caaggggctgggttctcggcgtttggagcaagtggacctggaagaccgccagctgatctt
ttgacacagatgagaaagtag
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integrated database retrieval system
