Setaria italica (foxtail millet): 101760529
Help
Entry
101760529 CDS
T02818
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 7
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101760529
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sita04121
]
101760529
Enzymes [BR:
sita01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101760529
Ubiquitin system [BR:
sita04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
101760529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
101760529
NCBI-ProteinID:
XP_004963410
UniProt:
A0A368QBA7
LinkDB
All DBs
Position
III:complement(2182434..2185246)
Genome browser
AA seq
346 aa
AA seq
DB search
MVRLRAGESFKAGEERRWKVHETAGKRATTTRATPGVRKKSKGSGSPDAATPASRERPGR
AAAAAAAAAGDATVEDTDALDCGVCFLPLKPPIFQCDEGHVVCSPCREKLAPKGRCHVCG
IATHNYHRCHAMERLVESICVPCPNAAHGCGARPAYYDQHVHCQTCPHAPRRCPGKDCSF
LGSTEALLDHFTGAHGWPSTTEIRAFETCSIPLYDGFNFILVEDDEDDDDHFTTTSSSSR
YLLLLNVMRQPLGHSITVHFIGQELRSEGLRCVLSYSRVQYHPDRHKFLGSHSLQSEINV
ECMDLADRLPDPADCFQFIVPDSVLRNIDKKDAMHIEVRVDIINLE
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggcttcgcgccggcgaatcttttaaggcaggagaggagcggcggtggaaggtc
catgaaactgcggggaagagagcaactacgactcgggcaacccctggcgtccgcaagaag
agcaagggatccggctcccccgatgcggcaacgccggcgtcgcgggagcggccggggaga
gctgcggcagcggcagcggcggcggcgggggacgcgacggtggaggacaccgacgccctc
gactgcggcgtgtgcttcctcccgctcaagccccccatcttccagtgtgacgagggccat
gtggtgtgctcgccgtgccgtgaaaagcttgcgccaaagggcaggtgccatgtttgcggc
attgccacgcataactaccacaggtgccacgccatggagcgcctggtggagtccatctgt
gtcccatgcccgaatgcagcccatggctgtggtgccaggccagcttactacgatcagcat
gtccactgccagacgtgtccacatgcaccacgccgctgcccgggcaaggactgcagcttc
cttggttctacagaggcgctcctggaccacttcaccggcgcacatggatggccttccacc
accgagatcagagcctttgagacatgcagcattcccctctacgatggattcaacttcatc
ctcgttgaggacgatgaggatgacgatgatcatttcaccactaccagcagcagcagtcgg
tacctgttactcctgaacgtgatgcggcagccacttggccactccatcaccgtgcacttc
atcggtcaagaattgcgctcagaaggactaagatgtgtgctcagctactcacgggtacaa
taccaccctgatcgtcataagttcctgggcagccattctctgcaatctgagatcaatgta
gaatgcatggatctcgccgataggctgcccgaccctgctgattgcttccagttcatagtg
ccggattccgttcttagaaacatcgacaagaaggatgctatgcacatcgaagtccgtgtc
gacatcatcaatctggagtag
DBGET
integrated database retrieval system
